Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 RPL36AP13-201ENST00000457490 317 ntBASIC4.15□□□□□ -1.75
VSX1Q9NZR4 RPL23AP65-201ENST00000475608 468 ntBASIC4.15□□□□□ -1.75
VSX1Q9NZR4 AL163973.1-201ENST00000484753 577 ntBASIC4.15□□□□□ -1.75
VSX1Q9NZR4 RPL39P36-201ENST00000490784 156 ntBASIC4.15□□□□□ -1.75
VSX1Q9NZR4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.15□□□□□ -1.75
VSX1Q9NZR4 HSPD1P15-201ENST00000505573 1122 ntBASIC4.15□□□□□ -1.75
VSX1Q9NZR4 PCBP2P3-201ENST00000509726 843 ntBASIC4.15□□□□□ -1.75
VSX1Q9NZR4 AC114797.1-201ENST00000514003 728 ntBASIC4.15□□□□□ -1.75
VSX1Q9NZR4 SCARNA24.1-201ENST00000516465 137 ntBASIC4.15□□□□□ -1.75
VSX1Q9NZR4 RNU7-51P-201ENST00000516560 62 ntBASIC4.15□□□□□ -1.75
VSX1Q9NZR4 MYL12AP1-201ENST00000518490 515 ntBASIC4.15□□□□□ -1.75
VSX1Q9NZR4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.15□□□□□ -1.75
VSX1Q9NZR4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.15□□□□□ -1.75
VSX1Q9NZR4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.15□□□□□ -1.75
VSX1Q9NZR4 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.15□□□□□ -1.75
VSX1Q9NZR4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.15□□□□□ -1.75
VSX1Q9NZR4 OR4P1P-201ENST00000530808 1136 ntBASIC4.15□□□□□ -1.75
VSX1Q9NZR4 OR8L1P-201ENST00000534005 955 ntBASIC4.15□□□□□ -1.75
VSX1Q9NZR4 AC128657.1-201ENST00000549459 145 ntBASIC4.15□□□□□ -1.75
VSX1Q9NZR4 EDDM3DP-201ENST00000554692 434 ntBASIC4.15□□□□□ -1.75
VSX1Q9NZR4 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.15□□□□□ -1.75
VSX1Q9NZR4 AC105129.1-201ENST00000560250 297 ntBASIC4.15□□□□□ -1.75
VSX1Q9NZR4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.15□□□□□ -1.75
VSX1Q9NZR4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.15□□□□□ -1.75
VSX1Q9NZR4 AC013244.1-201ENST00000604279 193 ntBASIC4.15□□□□□ -1.75
VSX1Q9NZR4 AC093838.1-201ENST00000613014 469 ntBASIC4.15□□□□□ -1.75
VSX1Q9NZR4 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VSX1Q9NZR4 AC079684.1-201ENST00000621405 437 ntBASIC4.15□□□□□ -1.75
VSX1Q9NZR4 AL359697.1-201ENST00000624879 587 ntBASIC4.15□□□□□ -1.75
VSX1Q9NZR4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VSX1Q9NZR4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
VSX1Q9NZR4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
VSX1Q9NZR4 AC108751.5-201ENST00000492880 1336 ntBASIC4.15□□□□□ -1.75
VSX1Q9NZR4 AC008725.1-201ENST00000605123 2263 ntBASIC4.15□□□□□ -1.75
VSX1Q9NZR4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VSX1Q9NZR4 MTCO1P9-201ENST00000505577 1534 ntBASIC4.15□□□□□ -1.75
VSX1Q9NZR4 AC068254.2-201ENST00000623938 3577 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.14□□□□□ -1.75
VSX1Q9NZR4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.14□□□□□ -1.75
VSX1Q9NZR4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
VSX1Q9NZR4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
VSX1Q9NZR4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VSX1Q9NZR4 Y_RNA.86-201ENST00000363020 111 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 RN7SKP115-201ENST00000363177 317 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 Y_RNA.166-201ENST00000363730 102 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VSX1Q9NZR4 SNORA51.8-201ENST00000384234 132 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 MIR3074-201ENST00000384885 81 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 MIR195-201ENST00000385194 87 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 MIR454-201ENST00000390180 115 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AL354719.1-201ENST00000406535 843 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 RNA5SP56-201ENST00000410277 118 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 RN7SKP267-201ENST00000410381 285 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 RNA5SP113-201ENST00000410486 84 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 RNU6-516P-201ENST00000411381 104 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.14□□□□□ -1.75
VSX1Q9NZR4 COX6B1P1-201ENST00000415962 213 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AC009161.1-201ENST00000417306 376 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AL627308.1-201ENST00000435693 821 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 CBWD4P-201ENST00000445695 655 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AC016696.1-201ENST00000446949 318 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 RPL29P29-201ENST00000448725 423 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 OR1H1P-201ENST00000448731 937 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 RPS17P13-201ENST00000448974 407 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 PPIAP3-201ENST00000450588 505 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AL645939.1-201ENST00000453429 797 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 RPS27AP17-201ENST00000463344 455 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 GMFBP1-201ENST00000467831 427 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 RPL23AP2-201ENST00000471227 466 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AC126389.1-201ENST00000477436 290 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 RPL32P9-201ENST00000487963 407 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 DEFB109F-201ENST00000491870 277 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AC068305.1-201ENST00000497406 726 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 MTCO2P30-201ENST00000503662 364 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.14□□□□□ -1.75
VSX1Q9NZR4 RNA5SP446-201ENST00000515955 82 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.14□□□□□ -1.75
VSX1Q9NZR4 IGKV2D-36-201ENST00000518643 226 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.14□□□□□ -1.75
VSX1Q9NZR4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AL352979.3-201ENST00000553515 247 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AC044860.2-201ENST00000561005 179 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.14□□□□□ -1.75
VSX1Q9NZR4 RPL7P50-201ENST00000600588 727 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AC006254.3-201ENST00000603353 884 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AC112230.1-201ENST00000604342 547 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AL031176.1-201ENST00000604554 466 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AL035413.2-201ENST00000604801 525 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AC103710.2-201ENST00000609912 942 ntBASIC4.14□□□□□ -1.75
VSX1Q9NZR4 AC105429.2-201ENST00000610567 517 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms