Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AL136116.1-201ENST00000403591 381 ntBASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 RN7SKP140-201ENST00000411196 284 ntBASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 AC009161.1-201ENST00000417306 376 ntBASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 AL138785.1-201ENST00000425821 331 ntBASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 IFNA20P-201ENST00000436840 528 ntBASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 TRBV26-201ENST00000456572 344 ntBASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 Y_RNA.632-201ENST00000459189 102 ntBASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 RNA5SP143-201ENST00000516936 115 ntBASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 SCOCP1-201ENST00000554676 349 ntBASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 AC113139.1-201ENST00000605049 239 ntBASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 AC000123.2-201ENST00000623124 461 ntBASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 AC112200.1-201ENST00000625015 234 ntBASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 AC006020.1-201ENST00000420179 1854 ntBASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 MTND5P3-201ENST00000438536 1800 ntBASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 OR4G1P-203ENST00000641984 1631 ntBASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.08□□□□□ -1.6
PDLIM7Q9NR12 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 AC096632.1-201ENST00000427395 310 ntBASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 SRIP2-201ENST00000428470 166 ntBASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 MTCO2P29-201ENST00000465212 189 ntBASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 AC078785.3-201ENST00000476607 425 ntBASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 RPL38P4-201ENST00000502376 214 ntBASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 TXNP6-201ENST00000510190 310 ntBASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 TMEM248P1-201ENST00000510579 951 ntBASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 SCARNA24.1-201ENST00000516465 137 ntBASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 RNA5SP337-201ENST00000517007 109 ntBASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 AP000907.2-201ENST00000530827 353 ntBASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 OR4T1P-201ENST00000554933 911 ntBASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 MIR4742-201ENST00000581069 85 ntBASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 MIR8069-1-201ENST00000616627 86 ntBASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 MIR8069-2-201ENST00000621412 86 ntBASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 THAP12P5-201ENST00000405864 2275 ntBASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 MTND5P33-201ENST00000571250 1450 ntBASIC5.07□□□□□ -1.6
PDLIM7Q9NR12 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 ZBTB8OSP1-201ENST00000342688 498 ntBASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 Y_RNA.255-201ENST00000364581 97 ntBASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 Y_RNA.474-201ENST00000384341 102 ntBASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 RNU6-628P-201ENST00000410675 107 ntBASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 NCOR1P3-201ENST00000420479 303 ntBASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.06□□□□□ -1.6
PDLIM7Q9NR12 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms