Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.89□□□□□ -2.11
CHD8Q9HCK8 WDR61-205ENST00000558459 884 ntTSL 3 BASIC1.89□□□□□ -2.11
CHD8Q9HCK8 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CHD8Q9HCK8 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.88□□□□□ -2.11
CHD8Q9HCK8 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.88□□□□□ -2.11
CHD8Q9HCK8 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC1.88□□□□□ -2.11
CHD8Q9HCK8 AC021146.5-201ENST00000503544 545 ntBASIC1.88□□□□□ -2.11
CHD8Q9HCK8 OR7K1P-201ENST00000546439 926 ntBASIC1.88□□□□□ -2.11
CHD8Q9HCK8 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.88□□□□□ -2.11
CHD8Q9HCK8 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.88□□□□□ -2.11
CHD8Q9HCK8 AC084768.2-201ENST00000622736 221 ntBASIC1.88□□□□□ -2.11
CHD8Q9HCK8 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.88□□□□□ -2.11
CHD8Q9HCK8 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CHD8Q9HCK8 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CHD8Q9HCK8 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.88□□□□□ -2.11
CHD8Q9HCK8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
CHD8Q9HCK8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CHD8Q9HCK8 RPS29P11-201ENST00000496507 171 ntBASIC1.88□□□□□ -2.11
CHD8Q9HCK8 RPS27P27-201ENST00000498779 255 ntBASIC1.88□□□□□ -2.11
CHD8Q9HCK8 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.88□□□□□ -2.11
CHD8Q9HCK8 U7.8-201ENST00000619968 63 ntBASIC1.88□□□□□ -2.11
CHD8Q9HCK8 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC1.88□□□□□ -2.11
CHD8Q9HCK8 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.87□□□□□ -2.11
CHD8Q9HCK8 MTCYBP7-201ENST00000419540 1134 ntBASIC1.87□□□□□ -2.11
CHD8Q9HCK8 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.87□□□□□ -2.11
CHD8Q9HCK8 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.87□□□□□ -2.11
CHD8Q9HCK8 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC1.87□□□□□ -2.11
CHD8Q9HCK8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.87□□□□□ -2.11
CHD8Q9HCK8 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.87□□□□□ -2.11
CHD8Q9HCK8 SNRPGP19-201ENST00000603826 189 ntBASIC1.87□□□□□ -2.11
CHD8Q9HCK8 MIR8081-201ENST00000611533 95 ntBASIC1.87□□□□□ -2.11
CHD8Q9HCK8 Y_RNA.783-201ENST00000613546 102 ntBASIC1.87□□□□□ -2.11
CHD8Q9HCK8 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC1.87□□□□□ -2.11
CHD8Q9HCK8 PROS2P-201ENST00000474651 1951 ntBASIC1.87□□□□□ -2.11
CHD8Q9HCK8 GTF2H2B-203ENST00000508065 1432 ntBASIC1.87□□□□□ -2.11
CHD8Q9HCK8 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
CHD8Q9HCK8 Y_RNA.167-201ENST00000363735 109 ntBASIC1.87□□□□□ -2.11
CHD8Q9HCK8 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.87□□□□□ -2.11
CHD8Q9HCK8 HMGB3P23-201ENST00000414981 585 ntBASIC1.87□□□□□ -2.11
CHD8Q9HCK8 ATG3P1-201ENST00000419507 911 ntBASIC1.87□□□□□ -2.11
CHD8Q9HCK8 AC125238.1-201ENST00000448842 249 ntBASIC1.87□□□□□ -2.11
CHD8Q9HCK8 RFC5P1-201ENST00000454419 874 ntBASIC1.87□□□□□ -2.11
CHD8Q9HCK8 AC011037.1-201ENST00000483964 558 ntBASIC1.87□□□□□ -2.11
CHD8Q9HCK8 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CHD8Q9HCK8 AL359273.1-201ENST00000510918 627 ntBASIC1.87□□□□□ -2.11
CHD8Q9HCK8 RN7SKP60-201ENST00000516985 239 ntBASIC1.87□□□□□ -2.11
CHD8Q9HCK8 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CHD8Q9HCK8 MIR4723-201ENST00000585070 81 ntBASIC1.87□□□□□ -2.11
CHD8Q9HCK8 BMS1P7-201ENST00000602440 1052 ntBASIC1.87□□□□□ -2.11
CHD8Q9HCK8 AC025946.2-201ENST00000603398 234 ntBASIC1.87□□□□□ -2.11
CHD8Q9HCK8 MTND4LP5-201ENST00000605152 292 ntBASIC1.87□□□□□ -2.11
CHD8Q9HCK8 AC131902.3-201ENST00000611767 581 ntBASIC1.87□□□□□ -2.11
CHD8Q9HCK8 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.87□□□□□ -2.11
CHD8Q9HCK8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.86□□□□□ -2.11
CHD8Q9HCK8 AC093909.5-201ENST00000621839 1799 ntBASIC1.86□□□□□ -2.11
CHD8Q9HCK8 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CHD8Q9HCK8 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CHD8Q9HCK8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CHD8Q9HCK8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CHD8Q9HCK8 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CHD8Q9HCK8 RPL23AP74-201ENST00000437246 471 ntBASIC1.86□□□□□ -2.11
CHD8Q9HCK8 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.86□□□□□ -2.11
CHD8Q9HCK8 GLYCAM1-201ENST00000546596 285 ntBASIC1.86□□□□□ -2.11
CHD8Q9HCK8 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CHD8Q9HCK8 AC025281.1-201ENST00000567026 265 ntBASIC1.86□□□□□ -2.11
CHD8Q9HCK8 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.86□□□□□ -2.11
CHD8Q9HCK8 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.86□□□□□ -2.11
CHD8Q9HCK8 AC006023.2-201ENST00000609916 167 ntBASIC1.86□□□□□ -2.11
CHD8Q9HCK8 MIR6132-201ENST00000622083 109 ntBASIC1.86□□□□□ -2.11
CHD8Q9HCK8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CHD8Q9HCK8 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
CHD8Q9HCK8 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CHD8Q9HCK8 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.86□□□□□ -2.11
CHD8Q9HCK8 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CHD8Q9HCK8 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.86□□□□□ -2.11
CHD8Q9HCK8 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC1.86□□□□□ -2.11
CHD8Q9HCK8 TRIAP1P1-201ENST00000427062 225 ntBASIC1.86□□□□□ -2.11
CHD8Q9HCK8 TXNP6-201ENST00000510190 310 ntBASIC1.86□□□□□ -2.11
CHD8Q9HCK8 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.86□□□□□ -2.11
CHD8Q9HCK8 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.86□□□□□ -2.11
CHD8Q9HCK8 AC008015.1-201ENST00000555505 465 ntBASIC1.86□□□□□ -2.11
CHD8Q9HCK8 AC067805.1-201ENST00000559344 470 ntBASIC1.86□□□□□ -2.11
CHD8Q9HCK8 AL451049.1-201ENST00000608672 497 ntBASIC1.86□□□□□ -2.11
CHD8Q9HCK8 AL158196.1-201ENST00000616786 434 ntBASIC1.86□□□□□ -2.11
CHD8Q9HCK8 AL133216.2-202ENST00000634512 349 ntBASIC1.86□□□□□ -2.11
CHD8Q9HCK8 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CHD8Q9HCK8 OR4G1P-203ENST00000641984 1631 ntBASIC1.85□□□□□ -2.11
CHD8Q9HCK8 MIR96-201ENST00000362288 78 ntBASIC1.85□□□□□ -2.11
CHD8Q9HCK8 RNU4-44P-201ENST00000363050 141 ntBASIC1.85□□□□□ -2.11
CHD8Q9HCK8 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.85□□□□□ -2.11
CHD8Q9HCK8 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.85□□□□□ -2.11
CHD8Q9HCK8 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.85□□□□□ -2.11
CHD8Q9HCK8 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.85□□□□□ -2.11
CHD8Q9HCK8 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC1.85□□□□□ -2.11
CHD8Q9HCK8 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC1.85□□□□□ -2.11
CHD8Q9HCK8 AC241377.1-201ENST00000619797 406 ntBASIC1.85□□□□□ -2.11
CHD8Q9HCK8 MTND4P35-201ENST00000604257 1375 ntBASIC1.85□□□□□ -2.11
CHD8Q9HCK8 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CHD8Q9HCK8 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.85□□□□□ -2.11
CHD8Q9HCK8 AC012078.1-201ENST00000405035 1646 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms