Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 ZNF734P-201ENST00000419494 1534 ntBASIC2.65□□□□□ -1.99
TRIM4Q9C037 RNU6-50P-201ENST00000362356 103 ntBASIC2.65□□□□□ -1.99
TRIM4Q9C037 RNU6-859P-201ENST00000362728 107 ntBASIC2.65□□□□□ -1.99
TRIM4Q9C037 Y_RNA.164-201ENST00000363709 102 ntBASIC2.65□□□□□ -1.99
TRIM4Q9C037 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.65□□□□□ -1.99
TRIM4Q9C037 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
TRIM4Q9C037 RNU6-98P-201ENST00000384173 107 ntBASIC2.65□□□□□ -1.99
TRIM4Q9C037 ATP5F1P6-201ENST00000402768 767 ntBASIC2.65□□□□□ -1.99
TRIM4Q9C037 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TRIM4Q9C037 RNU4-65P-201ENST00000410473 140 ntBASIC2.65□□□□□ -1.99
TRIM4Q9C037 YPEL5P1-201ENST00000419731 367 ntBASIC2.65□□□□□ -1.99
TRIM4Q9C037 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.65□□□□□ -1.99
TRIM4Q9C037 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.65□□□□□ -1.99
TRIM4Q9C037 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.65□□□□□ -1.99
TRIM4Q9C037 AC111193.1-201ENST00000504097 155 ntBASIC2.65□□□□□ -1.99
TRIM4Q9C037 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.65□□□□□ -1.99
TRIM4Q9C037 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.65□□□□□ -1.99
TRIM4Q9C037 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.65□□□□□ -1.99
TRIM4Q9C037 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.65□□□□□ -1.99
TRIM4Q9C037 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.65□□□□□ -1.99
TRIM4Q9C037 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.65□□□□□ -1.99
TRIM4Q9C037 AC026241.1-201ENST00000517873 2142 ntBASIC2.65□□□□□ -1.99
TRIM4Q9C037 SNORA67.1-201ENST00000364749 141 ntBASIC2.64□□□□□ -1.99
TRIM4Q9C037 MIR1289-2-201ENST00000408360 111 ntBASIC2.64□□□□□ -1.99
TRIM4Q9C037 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.64□□□□□ -1.99
TRIM4Q9C037 NIPA2P5-201ENST00000452282 464 ntBASIC2.64□□□□□ -1.99
TRIM4Q9C037 RPL23AP23-201ENST00000452590 471 ntBASIC2.64□□□□□ -1.99
TRIM4Q9C037 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.64□□□□□ -1.99
TRIM4Q9C037 AC010285.1-201ENST00000470580 392 ntBASIC2.64□□□□□ -1.99
TRIM4Q9C037 AC087879.1-201ENST00000474343 374 ntBASIC2.64□□□□□ -1.99
TRIM4Q9C037 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.64□□□□□ -1.99
TRIM4Q9C037 PCNAP1-201ENST00000505363 709 ntBASIC2.64□□□□□ -1.99
TRIM4Q9C037 RNA5SP468-201ENST00000516782 93 ntBASIC2.64□□□□□ -1.99
TRIM4Q9C037 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.64□□□□□ -1.99
TRIM4Q9C037 IGLV3-17-201ENST00000519099 244 ntBASIC2.64□□□□□ -1.99
TRIM4Q9C037 AP000790.1-201ENST00000528891 737 ntBASIC2.64□□□□□ -1.99
TRIM4Q9C037 OSBPL9P3-201ENST00000534523 595 ntBASIC2.64□□□□□ -1.99
TRIM4Q9C037 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TRIM4Q9C037 AP002770.2-201ENST00000543613 532 ntBASIC2.64□□□□□ -1.99
TRIM4Q9C037 OR7K1P-201ENST00000546439 926 ntBASIC2.64□□□□□ -1.99
TRIM4Q9C037 DEFB122-202ENST00000569013 197 ntBASIC2.64□□□□□ -1.99
TRIM4Q9C037 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.64□□□□□ -1.99
TRIM4Q9C037 AC079089.3-201ENST00000603094 673 ntBASIC2.64□□□□□ -1.99
TRIM4Q9C037 AC024153.1-201ENST00000603103 365 ntBASIC2.64□□□□□ -1.99
TRIM4Q9C037 AL161734.1-201ENST00000609720 557 ntBASIC2.64□□□□□ -1.99
TRIM4Q9C037 MIR6895-201ENST00000613497 78 ntBASIC2.64□□□□□ -1.99
TRIM4Q9C037 MIR6817-201ENST00000615588 66 ntBASIC2.64□□□□□ -1.99
TRIM4Q9C037 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
TRIM4Q9C037 SAGE4P-201ENST00000442271 3381 ntBASIC2.64□□□□□ -1.99
TRIM4Q9C037 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.64□□□□□ -1.99
TRIM4Q9C037 AC135776.4-201ENST00000624300 1904 ntBASIC2.64□□□□□ -1.99
TRIM4Q9C037 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
TRIM4Q9C037 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.63□□□□□ -1.99
TRIM4Q9C037 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.63□□□□□ -1.99
TRIM4Q9C037 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
TRIM4Q9C037 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
TRIM4Q9C037 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
TRIM4Q9C037 AL139276.1-201ENST00000311910 1001 ntBASIC2.63□□□□□ -1.99
TRIM4Q9C037 MIR1250-201ENST00000408098 113 ntBASIC2.63□□□□□ -1.99
TRIM4Q9C037 AC010385.1-201ENST00000412374 256 ntBASIC2.63□□□□□ -1.99
TRIM4Q9C037 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.63□□□□□ -1.99
TRIM4Q9C037 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.63□□□□□ -1.99
TRIM4Q9C037 AL513043.1-201ENST00000439124 535 ntBASIC2.63□□□□□ -1.99
TRIM4Q9C037 RABEPKP1-201ENST00000440529 1026 ntBASIC2.63□□□□□ -1.99
TRIM4Q9C037 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.63□□□□□ -1.99
TRIM4Q9C037 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.63□□□□□ -1.99
TRIM4Q9C037 AP000936.2-201ENST00000447151 681 ntBASIC2.63□□□□□ -1.99
TRIM4Q9C037 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.63□□□□□ -1.99
TRIM4Q9C037 AL035407.2-201ENST00000454090 378 ntBASIC2.63□□□□□ -1.99
TRIM4Q9C037 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.63□□□□□ -1.99
TRIM4Q9C037 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.63□□□□□ -1.99
TRIM4Q9C037 CDC42P4-201ENST00000510507 563 ntBASIC2.63□□□□□ -1.99
TRIM4Q9C037 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.63□□□□□ -1.99
TRIM4Q9C037 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.63□□□□□ -1.99
TRIM4Q9C037 OR11H5P-201ENST00000554039 926 ntBASIC2.63□□□□□ -1.99
TRIM4Q9C037 AC107954.1-201ENST00000565906 727 ntBASIC2.63□□□□□ -1.99
TRIM4Q9C037 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.63□□□□□ -1.99
TRIM4Q9C037 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.63□□□□□ -1.99
TRIM4Q9C037 AL110115.1-201ENST00000614396 364 ntBASIC2.63□□□□□ -1.99
TRIM4Q9C037 AC006963.1-201ENST00000624003 1052 ntBASIC2.63□□□□□ -1.99
TRIM4Q9C037 CR381653.2-201ENST00000624041 768 ntBASIC2.63□□□□□ -1.99
TRIM4Q9C037 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
TRIM4Q9C037 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.63□□□□□ -1.99
TRIM4Q9C037 ZNF658B-202ENST00000615961 3375 ntBASIC2.63□□□□□ -1.99
TRIM4Q9C037 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.62□□□□□ -1.99
TRIM4Q9C037 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TRIM4Q9C037 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
TRIM4Q9C037 RNU6-851P-201ENST00000384565 107 ntBASIC2.62□□□□□ -1.99
TRIM4Q9C037 RNU6-482P-201ENST00000391068 107 ntBASIC2.62□□□□□ -1.99
TRIM4Q9C037 AL360182.1-201ENST00000397433 468 ntBASIC2.62□□□□□ -1.99
TRIM4Q9C037 AL121972.1-201ENST00000402023 252 ntBASIC2.62□□□□□ -1.99
TRIM4Q9C037 PRRC2CP1-201ENST00000404428 159 ntBASIC2.62□□□□□ -1.99
TRIM4Q9C037 SNRPEP4-201ENST00000435815 279 ntBASIC2.62□□□□□ -1.99
TRIM4Q9C037 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.62□□□□□ -1.99
TRIM4Q9C037 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.62□□□□□ -1.99
TRIM4Q9C037 AC010301.1-201ENST00000473936 355 ntBASIC2.62□□□□□ -1.99
TRIM4Q9C037 AC132942.1-201ENST00000486753 483 ntBASIC2.62□□□□□ -1.99
TRIM4Q9C037 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.62□□□□□ -1.99
TRIM4Q9C037 RNA5SP148-201ENST00000516527 94 ntBASIC2.62□□□□□ -1.99
TRIM4Q9C037 RN7SKP40-201ENST00000517211 242 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms