Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 MTATP6P16-201ENST00000434543 526 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 RPS3AP52-201ENST00000435639 297 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 RPL21P89-201ENST00000444021 467 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 RNU7-182P-201ENST00000459009 62 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 VN1R17P-201ENST00000472048 1090 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 AC126389.1-201ENST00000477436 290 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 RNA5SP464-201ENST00000516251 108 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 AC103843.2-201ENST00000530523 682 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 MIR4424-201ENST00000585257 86 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 AC008737.2-201ENST00000599446 118 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 DPPA3P3-201ENST00000603842 430 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 AC004908.2-201ENST00000609090 574 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 AC091905.4-201ENST00000623432 202 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 AC138305.3-201ENST00000624988 240 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 MTND4LP32-201ENST00000636111 270 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 SALL4P2-201ENST00000423288 2910 ntBASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.06□□□□□ -1.6
FOXP3Q9BZS1 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 ELL2P4-201ENST00000446870 1376 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 RNU1-83P-201ENST00000363426 164 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 RN7SKP44-201ENST00000363602 316 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 Y_RNA.339-201ENST00000365325 102 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 Y_RNA.373-201ENST00000365600 103 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 Y_RNA.395-201ENST00000383945 109 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 Y_RNA.445-201ENST00000384168 102 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 Y_RNA.530-201ENST00000384587 101 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 MIR19A-201ENST00000384878 82 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 RNY4P36-201ENST00000391116 96 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 AC245054.2-201ENST00000415639 319 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 AC108059.3-201ENST00000456388 214 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 Y_RNA.635-201ENST00000459041 101 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 RPS4XP10-201ENST00000465034 731 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 AC020893.1-201ENST00000502452 580 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 RNU6-864P-201ENST00000516256 108 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 AL163153.1-201ENST00000554223 283 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 AL355836.1-201ENST00000555951 870 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 MIR4775-201ENST00000581168 75 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 AL022099.1-201ENST00000604551 712 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 AC124303.1-201ENST00000605703 360 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 AL627309.6-201ENST00000606857 840 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 AC084781.2-201ENST00000615568 161 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 AL158196.1-201ENST00000616786 434 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 AC244100.1-202ENST00000621554 382 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 AL138713.1-201ENST00000624026 2130 ntBASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
FOXP3Q9BZS1 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 INTS6P1-201ENST00000504674 2530 ntBASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 MAPK10-349ENST00000641767 3661 ntBASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 RNU6-1243P-201ENST00000364028 107 ntBASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 CYB5AP4-201ENST00000396692 399 ntBASIC5.04□□□□□ -1.6
FOXP3Q9BZS1 AL606923.1-201ENST00000406616 190 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms