Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AL670379.5-201ENST00000605253 252 ntBASIC3.03□□□□□ -1.92
SCAPERQ9BY12 AL670379.4-201ENST00000605279 254 ntBASIC3.03□□□□□ -1.92
SCAPERQ9BY12 AL670379.12-201ENST00000605291 253 ntBASIC3.03□□□□□ -1.92
SCAPERQ9BY12 AL670379.8-201ENST00000605353 252 ntBASIC3.03□□□□□ -1.92
SCAPERQ9BY12 AL670379.9-201ENST00000605428 253 ntBASIC3.03□□□□□ -1.92
SCAPERQ9BY12 AL670379.7-201ENST00000605823 252 ntBASIC3.03□□□□□ -1.92
SCAPERQ9BY12 AC108479.2-201ENST00000617314 601 ntBASIC3.03□□□□□ -1.92
SCAPERQ9BY12 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.03□□□□□ -1.92
SCAPERQ9BY12 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
SCAPERQ9BY12 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SCAPERQ9BY12 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.03□□□□□ -1.92
SCAPERQ9BY12 NR1H5P-201ENST00000452683 1377 ntBASIC3.03□□□□□ -1.92
SCAPERQ9BY12 RNU6-661P-201ENST00000362409 107 ntBASIC3.02□□□□□ -1.93
SCAPERQ9BY12 Y_RNA.118-201ENST00000363300 101 ntBASIC3.02□□□□□ -1.93
SCAPERQ9BY12 RNA5SP270-201ENST00000411361 118 ntBASIC3.02□□□□□ -1.93
SCAPERQ9BY12 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.02□□□□□ -1.93
SCAPERQ9BY12 AC009414.1-201ENST00000427200 443 ntBASIC3.02□□□□□ -1.93
SCAPERQ9BY12 AIG1P1-201ENST00000503376 148 ntBASIC3.02□□□□□ -1.93
SCAPERQ9BY12 AC008083.2-201ENST00000546707 476 ntBASIC3.02□□□□□ -1.93
SCAPERQ9BY12 AL512643.1-201ENST00000635735 524 ntBASIC3.02□□□□□ -1.93
SCAPERQ9BY12 MIR4278-201ENST00000636094 69 ntBASIC3.02□□□□□ -1.93
SCAPERQ9BY12 AC114546.3-201ENST00000623582 1734 ntBASIC3.02□□□□□ -1.93
SCAPERQ9BY12 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SCAPERQ9BY12 WWP1P1-201ENST00000466609 2769 ntBASIC3.02□□□□□ -1.93
SCAPERQ9BY12 AC107021.2-201ENST00000567714 2095 ntBASIC3.02□□□□□ -1.93
SCAPERQ9BY12 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.02□□□□□ -1.93
SCAPERQ9BY12 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.02□□□□□ -1.93
SCAPERQ9BY12 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.02□□□□□ -1.93
SCAPERQ9BY12 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SCAPERQ9BY12 RNA5SP190-201ENST00000365222 118 ntBASIC3.02□□□□□ -1.93
SCAPERQ9BY12 U8.10-201ENST00000384260 133 ntBASIC3.02□□□□□ -1.93
SCAPERQ9BY12 USP9YP27-201ENST00000418455 438 ntBASIC3.02□□□□□ -1.93
SCAPERQ9BY12 BTF3P4-201ENST00000418852 495 ntBASIC3.02□□□□□ -1.93
SCAPERQ9BY12 RPL7P31-201ENST00000450192 724 ntBASIC3.02□□□□□ -1.93
SCAPERQ9BY12 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.02□□□□□ -1.93
SCAPERQ9BY12 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.02□□□□□ -1.93
SCAPERQ9BY12 AC126177.3-201ENST00000551839 688 ntBASIC3.02□□□□□ -1.93
SCAPERQ9BY12 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.02□□□□□ -1.93
SCAPERQ9BY12 YWHAQP7-201ENST00000603536 658 ntBASIC3.02□□□□□ -1.93
SCAPERQ9BY12 AC073387.2-201ENST00000604797 784 ntBASIC3.02□□□□□ -1.93
SCAPERQ9BY12 AC091046.2-201ENST00000620775 665 ntBASIC3.02□□□□□ -1.93
SCAPERQ9BY12 AL353746.1-201ENST00000566293 6881 ntBASIC3.02□□□□□ -1.93
SCAPERQ9BY12 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SCAPERQ9BY12 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
SCAPERQ9BY12 AL359715.4-201ENST00000606629 1436 ntBASIC3.01□□□□□ -1.93
SCAPERQ9BY12 AC008173.1-201ENST00000418901 264 ntBASIC3.01□□□□□ -1.93
SCAPERQ9BY12 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.01□□□□□ -1.93
SCAPERQ9BY12 AC104308.1-201ENST00000454621 333 ntBASIC3.01□□□□□ -1.93
SCAPERQ9BY12 RPS15AP1-201ENST00000457423 391 ntBASIC3.01□□□□□ -1.93
SCAPERQ9BY12 AP000889.2-201ENST00000532684 490 ntBASIC3.01□□□□□ -1.93
SCAPERQ9BY12 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.01□□□□□ -1.93
SCAPERQ9BY12 MIR5002-201ENST00000584713 97 ntBASIC3.01□□□□□ -1.93
SCAPERQ9BY12 RPL23AP78-201ENST00000599928 470 ntBASIC3.01□□□□□ -1.93
SCAPERQ9BY12 PSMA6P4-201ENST00000603247 718 ntBASIC3.01□□□□□ -1.93
SCAPERQ9BY12 AC244517.12-201ENST00000623581 663 ntBASIC3.01□□□□□ -1.93
SCAPERQ9BY12 AC091953.2-201ENST00000623979 160 ntBASIC3.01□□□□□ -1.93
SCAPERQ9BY12 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SCAPERQ9BY12 Z82195.2-201ENST00000612348 18351 ntBASIC3□□□□□ -1.93
SCAPERQ9BY12 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SCAPERQ9BY12 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3□□□□□ -1.93
SCAPERQ9BY12 SDR42E1P3-201ENST00000438345 502 ntBASIC3□□□□□ -1.93
SCAPERQ9BY12 AC243772.1-201ENST00000451620 410 ntBASIC3□□□□□ -1.93
SCAPERQ9BY12 MTCO1P30-201ENST00000515244 580 ntBASIC3□□□□□ -1.93
SCAPERQ9BY12 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3□□□□□ -1.93
SCAPERQ9BY12 AC012321.1-201ENST00000561622 1588 ntBASIC2.99□□□□□ -1.93
SCAPERQ9BY12 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SCAPERQ9BY12 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.99□□□□□ -1.93
SCAPERQ9BY12 AL445685.2-201ENST00000422551 342 ntBASIC2.99□□□□□ -1.93
SCAPERQ9BY12 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.99□□□□□ -1.93
SCAPERQ9BY12 MTCO1P43-201ENST00000431831 488 ntBASIC2.99□□□□□ -1.93
SCAPERQ9BY12 RPL34P26-201ENST00000445636 354 ntBASIC2.99□□□□□ -1.93
SCAPERQ9BY12 AP000852.1-201ENST00000472460 573 ntBASIC2.99□□□□□ -1.93
SCAPERQ9BY12 ISCA1P3-201ENST00000577104 373 ntBASIC2.99□□□□□ -1.93
SCAPERQ9BY12 AC008687.2-201ENST00000597865 520 ntBASIC2.99□□□□□ -1.93
SCAPERQ9BY12 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.99□□□□□ -1.93
SCAPERQ9BY12 SNRPGP19-201ENST00000603826 189 ntBASIC2.99□□□□□ -1.93
SCAPERQ9BY12 AC092650.2-201ENST00000619984 902 ntBASIC2.99□□□□□ -1.93
SCAPERQ9BY12 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.99□□□□□ -1.93
SCAPERQ9BY12 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
SCAPERQ9BY12 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
SCAPERQ9BY12 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.98□□□□□ -1.93
SCAPERQ9BY12 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SCAPERQ9BY12 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SCAPERQ9BY12 MIR9-3-201ENST00000385084 90 ntBASIC2.98□□□□□ -1.93
SCAPERQ9BY12 AL591719.1-201ENST00000444669 744 ntBASIC2.98□□□□□ -1.93
SCAPERQ9BY12 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.98□□□□□ -1.93
SCAPERQ9BY12 AC022431.1-201ENST00000450941 438 ntBASIC2.98□□□□□ -1.93
SCAPERQ9BY12 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.98□□□□□ -1.93
SCAPERQ9BY12 AP000873.1-201ENST00000463987 400 ntBASIC2.98□□□□□ -1.93
SCAPERQ9BY12 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.98□□□□□ -1.93
SCAPERQ9BY12 AL359821.1-201ENST00000605519 182 ntBASIC2.98□□□□□ -1.93
SCAPERQ9BY12 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.98□□□□□ -1.93
SCAPERQ9BY12 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SCAPERQ9BY12 AC010680.1-201ENST00000590024 3590 ntBASIC2.98□□□□□ -1.93
SCAPERQ9BY12 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SCAPERQ9BY12 RNA5SP295-201ENST00000362655 121 ntBASIC2.97□□□□□ -1.93
SCAPERQ9BY12 Y_RNA.796-201ENST00000364268 102 ntBASIC2.97□□□□□ -1.93
SCAPERQ9BY12 Y_RNA.799-201ENST00000364992 102 ntBASIC2.97□□□□□ -1.93
SCAPERQ9BY12 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.97□□□□□ -1.93
SCAPERQ9BY12 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms