Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM56Q9BRZ2 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 Y_RNA.193-201ENST00000363979 102 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 RNU6-1032P-201ENST00000384100 107 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 SNORA48.4-201ENST00000391089 134 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 CYB5AP4-201ENST00000396692 399 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 MRPL42P3-201ENST00000401492 326 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 RN7SKP16-201ENST00000410180 299 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 RNU2-36P-201ENST00000410361 191 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 MCFD2P1-201ENST00000417812 300 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 CYCSP10-201ENST00000417973 294 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 ATG3P1-201ENST00000419507 911 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 RPS27AP12-201ENST00000429552 465 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 SNAP23P1-201ENST00000433229 246 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 AL451139.1-201ENST00000434718 346 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 MIR2053-201ENST00000459295 91 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 RN7SL814P-201ENST00000487715 300 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 SNORA25.10-201ENST00000515926 124 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 RNU6-189P-201ENST00000516120 101 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 RNU6-764P-201ENST00000516396 105 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 RNU6-1092P-201ENST00000516955 87 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 IGKV2D-36-201ENST00000518643 226 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 AC023442.1-201ENST00000531247 422 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 CR383656.7-201ENST00000548164 174 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 OR11H5P-201ENST00000554039 926 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 AC010653.1-201ENST00000571108 881 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 MIR4293-201ENST00000584305 78 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 AL031176.1-201ENST00000604554 466 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 AC011626.1-201ENST00000604710 562 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 AC012443.1-201ENST00000605605 231 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 AL442067.1-201ENST00000613261 223 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 Z69720.2-201ENST00000624755 279 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 TPTE2P4-201ENST00000258589 1605 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 AC103710.2-202ENST00000641454 2853 ntBASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM56Q9BRZ2 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 RNU6-1115P-201ENST00000362490 106 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 RNU6-702P-201ENST00000364982 107 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 RNU6-61P-201ENST00000365528 109 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 RNU6-505P-201ENST00000384427 107 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 Y_RNA.576-201ENST00000384781 102 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 RNU4-65P-201ENST00000410473 140 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 RPL7P46-201ENST00000425129 740 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 CALM2P2-201ENST00000428512 440 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AC092162.1-201ENST00000432828 434 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 RPS20P1-201ENST00000434853 354 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 RPL23AP89-201ENST00000439324 255 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 GEMIN8P3-201ENST00000445417 720 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AC105399.1-202ENST00000447303 205 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AC245028.2-201ENST00000458673 253 ntBASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM56Q9BRZ2 AC104806.1-201ENST00000508720 308 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms