Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.68□□□□□ -1.98
ABCA3Q99758 LRRC37A5P-203ENST00000580181 585 ntBASIC2.68□□□□□ -1.98
ABCA3Q99758 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.68□□□□□ -1.98
ABCA3Q99758 AC013562.2-201ENST00000611632 603 ntBASIC2.68□□□□□ -1.98
ABCA3Q99758 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.68□□□□□ -1.98
ABCA3Q99758 AC091046.2-201ENST00000620775 665 ntBASIC2.68□□□□□ -1.98
ABCA3Q99758 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
ABCA3Q99758 AL139276.1-201ENST00000311910 1001 ntBASIC2.67□□□□□ -1.98
ABCA3Q99758 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ABCA3Q99758 AL590084.1-201ENST00000407885 387 ntBASIC2.67□□□□□ -1.98
ABCA3Q99758 NEK4P1-201ENST00000433383 879 ntBASIC2.67□□□□□ -1.98
ABCA3Q99758 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.67□□□□□ -1.98
ABCA3Q99758 CBWD4P-201ENST00000445695 655 ntBASIC2.67□□□□□ -1.98
ABCA3Q99758 FABP5P13-201ENST00000452144 328 ntBASIC2.67□□□□□ -1.98
ABCA3Q99758 AC089999.1-201ENST00000460336 374 ntBASIC2.67□□□□□ -1.98
ABCA3Q99758 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.67□□□□□ -1.98
ABCA3Q99758 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.67□□□□□ -1.98
ABCA3Q99758 MIR5002-201ENST00000584713 97 ntBASIC2.67□□□□□ -1.98
ABCA3Q99758 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.67□□□□□ -1.98
ABCA3Q99758 AL355578.1-201ENST00000607405 1328 ntBASIC2.67□□□□□ -1.98
ABCA3Q99758 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
ABCA3Q99758 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.67□□□□□ -1.98
ABCA3Q99758 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.67□□□□□ -1.98
ABCA3Q99758 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.66□□□□□ -1.98
ABCA3Q99758 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.66□□□□□ -1.98
ABCA3Q99758 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.66□□□□□ -1.98
ABCA3Q99758 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.66□□□□□ -1.98
ABCA3Q99758 RNA5SP490-201ENST00000517141 136 ntBASIC2.66□□□□□ -1.98
ABCA3Q99758 OR4T1P-201ENST00000554933 911 ntBASIC2.66□□□□□ -1.98
ABCA3Q99758 MIR3683-201ENST00000580847 82 ntBASIC2.66□□□□□ -1.98
ABCA3Q99758 AC068790.3-201ENST00000602988 553 ntBASIC2.66□□□□□ -1.98
ABCA3Q99758 AC004241.3-201ENST00000611728 517 ntBASIC2.66□□□□□ -1.98
ABCA3Q99758 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
ABCA3Q99758 AC005005.2-201ENST00000420779 380 ntBASIC2.65□□□□□ -1.98
ABCA3Q99758 AL163540.1-201ENST00000485382 386 ntBASIC2.65□□□□□ -1.98
ABCA3Q99758 ATG10-AS1-201ENST00000504846 648 ntBASIC2.65□□□□□ -1.98
ABCA3Q99758 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.65□□□□□ -1.98
ABCA3Q99758 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.65□□□□□ -1.98
ABCA3Q99758 AC084768.2-201ENST00000622736 221 ntBASIC2.65□□□□□ -1.98
ABCA3Q99758 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.65□□□□□ -1.98
ABCA3Q99758 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.65□□□□□ -1.98
ABCA3Q99758 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
ABCA3Q99758 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.65□□□□□ -1.98
ABCA3Q99758 AC110774.1-201ENST00000623567 2018 ntBASIC2.65□□□□□ -1.99
ABCA3Q99758 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
ABCA3Q99758 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
ABCA3Q99758 MIR6073-201ENST00000352083 89 ntBASIC2.65□□□□□ -1.99
ABCA3Q99758 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.65□□□□□ -1.99
ABCA3Q99758 YWHAZP7-201ENST00000436906 631 ntBASIC2.65□□□□□ -1.99
ABCA3Q99758 AC007182.2-201ENST00000489251 402 ntBASIC2.65□□□□□ -1.99
ABCA3Q99758 RPL23AP63-201ENST00000498752 471 ntBASIC2.65□□□□□ -1.99
ABCA3Q99758 LDHBP3-201ENST00000514909 822 ntBASIC2.65□□□□□ -1.99
ABCA3Q99758 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.65□□□□□ -1.99
ABCA3Q99758 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.65□□□□□ -1.99
ABCA3Q99758 SUB1P3-201ENST00000564581 315 ntBASIC2.65□□□□□ -1.99
ABCA3Q99758 AL160237.3-201ENST00000604114 1013 ntBASIC2.65□□□□□ -1.99
ABCA3Q99758 DCAF13P1-201ENST00000495256 1330 ntBASIC2.65□□□□□ -1.99
ABCA3Q99758 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
ABCA3Q99758 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ABCA3Q99758 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ABCA3Q99758 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ABCA3Q99758 AP1B1P2-201ENST00000416196 106 ntBASIC2.64□□□□□ -1.99
ABCA3Q99758 AL138799.3-201ENST00000438968 350 ntBASIC2.64□□□□□ -1.99
ABCA3Q99758 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.64□□□□□ -1.99
ABCA3Q99758 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.64□□□□□ -1.99
ABCA3Q99758 SMARCE1P4-201ENST00000523647 241 ntBASIC2.64□□□□□ -1.99
ABCA3Q99758 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.64□□□□□ -1.99
ABCA3Q99758 PSMA6P4-201ENST00000603247 718 ntBASIC2.64□□□□□ -1.99
ABCA3Q99758 AL137847.3-201ENST00000611521 109 ntBASIC2.64□□□□□ -1.99
ABCA3Q99758 AL139811.1-201ENST00000424779 2299 ntBASIC2.63□□□□□ -1.99
ABCA3Q99758 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.63□□□□□ -1.99
ABCA3Q99758 AC027514.1-201ENST00000588561 1603 ntBASIC2.63□□□□□ -1.99
ABCA3Q99758 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
ABCA3Q99758 SNORA51.11-201ENST00000384442 131 ntBASIC2.63□□□□□ -1.99
ABCA3Q99758 RPL23AP76-201ENST00000441860 458 ntBASIC2.63□□□□□ -1.99
ABCA3Q99758 RPS27P5-201ENST00000444247 244 ntBASIC2.63□□□□□ -1.99
ABCA3Q99758 CASP3P1-201ENST00000446037 609 ntBASIC2.63□□□□□ -1.99
ABCA3Q99758 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.63□□□□□ -1.99
ABCA3Q99758 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.63□□□□□ -1.99
ABCA3Q99758 AC055855.1-201ENST00000489563 579 ntBASIC2.63□□□□□ -1.99
ABCA3Q99758 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.63□□□□□ -1.99
ABCA3Q99758 AC020895.1-201ENST00000595362 272 ntBASIC2.63□□□□□ -1.99
ABCA3Q99758 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.63□□□□□ -1.99
ABCA3Q99758 AC016877.3-201ENST00000606778 504 ntBASIC2.63□□□□□ -1.99
ABCA3Q99758 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.63□□□□□ -1.99
ABCA3Q99758 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
ABCA3Q99758 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.62□□□□□ -1.99
ABCA3Q99758 MTCO3P21-201ENST00000430791 643 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 AC140059.1-201ENST00000489238 361 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 AL161713.1-201ENST00000555538 145 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 MIR4458-201ENST00000578872 75 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 AP005136.1-201ENST00000579765 429 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.62□□□□□ -1.99
ABCA3Q99758 RPAP2P1-201ENST00000603626 1168 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 SNRPGP19-201ENST00000603826 189 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 AL627309.6-201ENST00000606857 840 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 Y_RNA.783-201ENST00000613546 102 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 AC106730.3-201ENST00000624568 641 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 AL118496.1-201ENST00000440201 1812 ntBASIC2.62□□□□□ -1.99
ABCA3Q99758 MTND5P7-201ENST00000413558 1798 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms