Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
MEIS3Q99687 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
MEIS3Q99687 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MEIS3Q99687 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.04□□□□□ -1.76
MEIS3Q99687 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.04□□□□□ -1.76
MEIS3Q99687 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MEIS3Q99687 Y_RNA.18-201ENST00000362461 102 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 RNU6-666P-201ENST00000363499 107 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 RNU6-694P-201ENST00000364071 147 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 AL138878.1-201ENST00000405131 347 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 AL034374.1-201ENST00000406329 351 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 RN7SKP285-201ENST00000410137 318 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.04□□□□□ -1.76
MEIS3Q99687 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.04□□□□□ -1.76
MEIS3Q99687 AL009174.1-201ENST00000426577 416 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.04□□□□□ -1.76
MEIS3Q99687 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
MEIS3Q99687 MTND1P28-201ENST00000435623 950 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.04□□□□□ -1.76
MEIS3Q99687 MTCO2P25-201ENST00000447065 681 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 RPL23AP35-201ENST00000451906 501 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 AC002553.2-201ENST00000453217 340 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 HMGN1P18-201ENST00000457642 277 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 RN7SL504P-201ENST00000494496 287 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
MEIS3Q99687 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.04□□□□□ -1.76
MEIS3Q99687 RPL7L1P13-201ENST00000511702 739 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 PHBP14-201ENST00000512887 367 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 RNU1-143P-201ENST00000516296 146 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 AC136619.2-201ENST00000563361 631 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.04□□□□□ -1.76
MEIS3Q99687 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.04□□□□□ -1.76
MEIS3Q99687 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.04□□□□□ -1.76
MEIS3Q99687 OR4G1P-201ENST00000588632 938 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.04□□□□□ -1.76
MEIS3Q99687 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.04□□□□□ -1.76
MEIS3Q99687 AC068276.1-201ENST00000605793 379 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.04□□□□□ -1.76
MEIS3Q99687 U1.23-201ENST00000610293 146 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 AC096577.2-201ENST00000611455 153 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 RNU1-68P-201ENST00000615382 146 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 U1.39-201ENST00000621562 146 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 AC073348.1-201ENST00000623002 331 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 AC025048.6-202ENST00000627667 438 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MEIS3Q99687 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MEIS3Q99687 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.04□□□□□ -1.76
MEIS3Q99687 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.04□□□□□ -1.76
MEIS3Q99687 USP8P1-201ENST00000494673 3183 ntBASIC4.04□□□□□ -1.76
MEIS3Q99687 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
MEIS3Q99687 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MEIS3Q99687 Y_RNA.303-201ENST00000364998 94 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 RNU4-31P-201ENST00000384211 141 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 MTCYBP36-201ENST00000404146 440 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 RPL23AP47-201ENST00000408017 460 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 SNORA11C-201ENST00000408532 129 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 AC068533.2-201ENST00000411872 306 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 AMD1P2-201ENST00000412936 992 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 Z99497.1-201ENST00000421282 135 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MEIS3Q99687 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.03□□□□□ -1.76
MEIS3Q99687 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.03□□□□□ -1.76
MEIS3Q99687 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.03□□□□□ -1.76
MEIS3Q99687 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
MEIS3Q99687 CACYBPP1-201ENST00000438592 684 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 AL035551.1-201ENST00000446931 348 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 AC115115.1-201ENST00000449927 248 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 AC093392.2-201ENST00000450682 337 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 AC022431.1-201ENST00000450941 438 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.03□□□□□ -1.76
MEIS3Q99687 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MEIS3Q99687 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.03□□□□□ -1.76
MEIS3Q99687 RN7SL809P-201ENST00000482040 297 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.03□□□□□ -1.76
MEIS3Q99687 AC011352.3-201ENST00000505162 593 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 AC116353.2-201ENST00000505332 712 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.03□□□□□ -1.76
MEIS3Q99687 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.03□□□□□ -1.76
MEIS3Q99687 AC104027.1-201ENST00000521887 300 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.03□□□□□ -1.76
MEIS3Q99687 AC009063.1-201ENST00000563342 702 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 AC092325.1-201ENST00000566449 554 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 MIR5680-201ENST00000577577 84 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.03□□□□□ -1.76
MEIS3Q99687 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.03□□□□□ -1.76
MEIS3Q99687 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.03□□□□□ -1.76
MEIS3Q99687 YPEL5P2-201ENST00000605553 359 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 AC006566.1-201ENST00000608943 513 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 uc_338.25-201ENST00000613756 156 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 AC072046.2-201ENST00000618366 268 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 U6.42-201ENST00000618440 107 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.03□□□□□ -1.76
MEIS3Q99687 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
MEIS3Q99687 AC099654.12-201ENST00000639868 649 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
MEIS3Q99687 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MEIS3Q99687 AC004520.1-201ENST00000608362 1413 ntBASIC4.03□□□□□ -1.76
MEIS3Q99687 MTND5P1-201ENST00000445440 1375 ntBASIC4.02□□□□□ -1.77
MEIS3Q99687 AL079343.1-201ENST00000572358 1771 ntBASIC4.02□□□□□ -1.77
MEIS3Q99687 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms