Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AC021171.1-201ENST00000603137 706 ntBASIC3.69□□□□□ -1.82
RAD9AQ99638 AL353778.1-201ENST00000603149 408 ntBASIC3.69□□□□□ -1.82
RAD9AQ99638 AC011468.4-201ENST00000603942 409 ntBASIC3.69□□□□□ -1.82
RAD9AQ99638 IGHV3-29-201ENST00000604817 344 ntBASIC3.69□□□□□ -1.82
RAD9AQ99638 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.69□□□□□ -1.82
RAD9AQ99638 AC245297.2-201ENST00000610119 565 ntBASIC3.69□□□□□ -1.82
RAD9AQ99638 AC243773.3-201ENST00000613270 256 ntBASIC3.69□□□□□ -1.82
RAD9AQ99638 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.69□□□□□ -1.82
RAD9AQ99638 AP003485.2-201ENST00000623636 610 ntBASIC3.69□□□□□ -1.82
RAD9AQ99638 AC091905.1-201ENST00000624400 311 ntBASIC3.69□□□□□ -1.82
RAD9AQ99638 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.69□□□□□ -1.82
RAD9AQ99638 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RAD9AQ99638 MTCO1P23-201ENST00000415223 1526 ntBASIC3.69□□□□□ -1.82
RAD9AQ99638 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.69□□□□□ -1.82
RAD9AQ99638 OR5BR1P-201ENST00000524992 1330 ntBASIC3.69□□□□□ -1.82
RAD9AQ99638 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
RAD9AQ99638 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RAD9AQ99638 MIR422A-201ENST00000362286 90 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 SNORD82-201ENST00000365530 70 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 AL357075.1-201ENST00000404107 726 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 RNA5SP56-201ENST00000410277 118 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 AC017079.2-201ENST00000416102 485 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.68□□□□□ -1.82
RAD9AQ99638 MTND5P25-201ENST00000430499 799 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 MRPS18BP2-201ENST00000434310 759 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 HMGB1P12-201ENST00000438594 598 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.68□□□□□ -1.82
RAD9AQ99638 AL662791.1-201ENST00000441992 928 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.68□□□□□ -1.82
RAD9AQ99638 AC097262.1-201ENST00000452559 548 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 USP9YP34-201ENST00000453983 808 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.68□□□□□ -1.82
RAD9AQ99638 AC026410.2-201ENST00000460281 156 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 RPS15AP17-201ENST00000470598 390 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 VN1R17P-201ENST00000472048 1090 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 AC114981.1-201ENST00000503897 678 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RAD9AQ99638 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.68□□□□□ -1.82
RAD9AQ99638 HMGB3P15-201ENST00000507326 574 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RAD9AQ99638 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.68□□□□□ -1.82
RAD9AQ99638 AC026412.2-201ENST00000512270 1075 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RAD9AQ99638 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.68□□□□□ -1.82
RAD9AQ99638 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.68□□□□□ -1.82
RAD9AQ99638 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.68□□□□□ -1.82
RAD9AQ99638 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.68□□□□□ -1.82
RAD9AQ99638 AP005205.1-201ENST00000563503 508 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RAD9AQ99638 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.68□□□□□ -1.82
RAD9AQ99638 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.68□□□□□ -1.82
RAD9AQ99638 AC022146.1-201ENST00000595307 847 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 AC006023.2-201ENST00000609916 167 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.68□□□□□ -1.82
RAD9AQ99638 AC131159.1-201ENST00000621854 213 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.68□□□□□ -1.82
RAD9AQ99638 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.68□□□□□ -1.82
RAD9AQ99638 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
RAD9AQ99638 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.68□□□□□ -1.82
RAD9AQ99638 AL079343.1-201ENST00000572358 1771 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
RAD9AQ99638 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RAD9AQ99638 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
RAD9AQ99638 ZNF542P-204ENST00000482727 1305 ntBASIC3.68□□□□□ -1.82
RAD9AQ99638 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.67□□□□□ -1.82
RAD9AQ99638 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RAD9AQ99638 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
RAD9AQ99638 RPL23AP29-201ENST00000397284 453 ntBASIC3.67□□□□□ -1.82
RAD9AQ99638 AL138880.1-201ENST00000405824 642 ntBASIC3.67□□□□□ -1.82
RAD9AQ99638 AP000567.1-201ENST00000406413 156 ntBASIC3.67□□□□□ -1.82
RAD9AQ99638 RPL5P18-201ENST00000406671 891 ntBASIC3.67□□□□□ -1.82
RAD9AQ99638 RAP1BP1-201ENST00000412709 553 ntBASIC3.67□□□□□ -1.82
RAD9AQ99638 RPL30P2-201ENST00000414021 291 ntBASIC3.67□□□□□ -1.82
RAD9AQ99638 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.67□□□□□ -1.82
RAD9AQ99638 FNDC3CP-201ENST00000420795 1155 ntBASIC3.67□□□□□ -1.82
RAD9AQ99638 AC012065.2-201ENST00000421295 375 ntBASIC3.67□□□□□ -1.82
RAD9AQ99638 YWHAZP7-201ENST00000436906 631 ntBASIC3.67□□□□□ -1.82
RAD9AQ99638 AL354941.1-201ENST00000438600 464 ntBASIC3.67□□□□□ -1.82
RAD9AQ99638 MTCYBP34-201ENST00000439552 670 ntBASIC3.67□□□□□ -1.82
RAD9AQ99638 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.67□□□□□ -1.82
RAD9AQ99638 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.67□□□□□ -1.82
RAD9AQ99638 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.67□□□□□ -1.82
RAD9AQ99638 DNAJC19P1-201ENST00000455312 319 ntBASIC3.67□□□□□ -1.82
RAD9AQ99638 AL109741.2-201ENST00000455561 343 ntBASIC3.67□□□□□ -1.82
RAD9AQ99638 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.67□□□□□ -1.82
RAD9AQ99638 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.67□□□□□ -1.82
RAD9AQ99638 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.67□□□□□ -1.82
RAD9AQ99638 AC097462.2-201ENST00000504623 481 ntBASIC3.67□□□□□ -1.82
RAD9AQ99638 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.67□□□□□ -1.82
RAD9AQ99638 AC021678.1-201ENST00000505195 936 ntBASIC3.67□□□□□ -1.82
RAD9AQ99638 XKRY-201ENST00000510392 1100 ntBASIC3.67□□□□□ -1.82
RAD9AQ99638 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.67□□□□□ -1.82
RAD9AQ99638 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.67□□□□□ -1.82
RAD9AQ99638 AC104986.1-201ENST00000517978 436 ntBASIC3.67□□□□□ -1.82
RAD9AQ99638 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.67□□□□□ -1.82
RAD9AQ99638 HSPA8P13-201ENST00000523715 472 ntBASIC3.67□□□□□ -1.82
RAD9AQ99638 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RAD9AQ99638 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.67□□□□□ -1.82
RAD9AQ99638 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms