Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AC114981.1-201ENST00000503897 678 ntBASIC3.42□□□□□ -1.86
ZNF560Q96MR9 AC113420.1-201ENST00000507903 571 ntBASIC3.42□□□□□ -1.86
ZNF560Q96MR9 MTND4LP22-201ENST00000508209 276 ntBASIC3.42□□□□□ -1.86
ZNF560Q96MR9 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.42□□□□□ -1.86
ZNF560Q96MR9 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.42□□□□□ -1.86
ZNF560Q96MR9 MTATP6P9-201ENST00000515039 680 ntBASIC3.42□□□□□ -1.86
ZNF560Q96MR9 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.42□□□□□ -1.86
ZNF560Q96MR9 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.42□□□□□ -1.86
ZNF560Q96MR9 AC011602.1-201ENST00000546484 331 ntBASIC3.42□□□□□ -1.86
ZNF560Q96MR9 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.42□□□□□ -1.86
ZNF560Q96MR9 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.42□□□□□ -1.86
ZNF560Q96MR9 MIR3908-201ENST00000579798 126 ntBASIC3.42□□□□□ -1.86
ZNF560Q96MR9 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.42□□□□□ -1.86
ZNF560Q96MR9 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.42□□□□□ -1.86
ZNF560Q96MR9 AL390240.1-201ENST00000612950 384 ntBASIC3.42□□□□□ -1.86
ZNF560Q96MR9 AC022306.3-201ENST00000619930 550 ntBASIC3.42□□□□□ -1.86
ZNF560Q96MR9 AC022509.4-201ENST00000621404 572 ntBASIC3.42□□□□□ -1.86
ZNF560Q96MR9 AC091903.1-201ENST00000624322 454 ntBASIC3.42□□□□□ -1.86
ZNF560Q96MR9 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
ZNF560Q96MR9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
ZNF560Q96MR9 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.41□□□□□ -1.86
ZNF560Q96MR9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.41□□□□□ -1.86
ZNF560Q96MR9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
ZNF560Q96MR9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.41□□□□□ -1.86
ZNF560Q96MR9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ZNF560Q96MR9 AC093010.3-201ENST00000570269 15214 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 RNU1-75P-201ENST00000347264 129 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
ZNF560Q96MR9 RNU6-1155P-201ENST00000363554 107 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 Y_RNA.472-201ENST00000384322 102 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 MIR483-201ENST00000385070 76 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 RPL21P32-201ENST00000419877 477 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 AC019178.2-201ENST00000423595 505 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.41□□□□□ -1.86
ZNF560Q96MR9 BX679664.1-201ENST00000434429 253 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 RABEPKP1-201ENST00000440529 1026 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 MTCO2P25-201ENST00000447065 681 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 AC115115.1-201ENST00000449927 248 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.41□□□□□ -1.86
ZNF560Q96MR9 RPL23AP31-201ENST00000456160 467 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.41□□□□□ -1.86
ZNF560Q96MR9 AP001992.1-205ENST00000462248 379 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 AC011979.1-201ENST00000472300 483 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 AC012181.1-201ENST00000479895 423 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 RPS4XP22-201ENST00000480755 780 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 AC021146.5-201ENST00000503544 545 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.41□□□□□ -1.86
ZNF560Q96MR9 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.41□□□□□ -1.86
ZNF560Q96MR9 SNORA74D-201ENST00000516404 141 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 AC021451.1-201ENST00000523498 1129 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
ZNF560Q96MR9 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.41□□□□□ -1.86
ZNF560Q96MR9 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.41□□□□□ -1.86
ZNF560Q96MR9 AL132657.2-201ENST00000564417 358 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 FAM60BP-201ENST00000578364 658 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 BNIP3P26-201ENST00000600827 554 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 AP001330.4-201ENST00000604350 154 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ZNF560Q96MR9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.41□□□□□ -1.86
ZNF560Q96MR9 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.41□□□□□ -1.86
ZNF560Q96MR9 AC243773.3-201ENST00000613270 256 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 AC025588.4-201ENST00000615802 908 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 AC095031.1-201ENST00000623685 672 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 AC018692.3-201ENST00000623929 123 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 AC026422.1-201ENST00000623961 452 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 AC073476.4-201ENST00000628409 72 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ZNF560Q96MR9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ZNF560Q96MR9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.41□□□□□ -1.86
ZNF560Q96MR9 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.41□□□□□ -1.86
ZNF560Q96MR9 OR5BR1P-201ENST00000524992 1330 ntBASIC3.41□□□□□ -1.86
ZNF560Q96MR9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
ZNF560Q96MR9 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.4□□□□□ -1.86
ZNF560Q96MR9 SRP72P2-201ENST00000344851 1979 ntBASIC3.4□□□□□ -1.86
ZNF560Q96MR9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.4□□□□□ -1.87
ZNF560Q96MR9 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF560Q96MR9 RNA5SP374-201ENST00000362939 125 ntBASIC3.4□□□□□ -1.87
ZNF560Q96MR9 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.4□□□□□ -1.87
ZNF560Q96MR9 SNORA7.4-201ENST00000384249 137 ntBASIC3.4□□□□□ -1.87
ZNF560Q96MR9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
ZNF560Q96MR9 HMGB1P17-201ENST00000403495 628 ntBASIC3.4□□□□□ -1.87
ZNF560Q96MR9 AL591034.1-201ENST00000407447 340 ntBASIC3.4□□□□□ -1.87
ZNF560Q96MR9 AL590084.1-201ENST00000407885 387 ntBASIC3.4□□□□□ -1.87
ZNF560Q96MR9 RNA5SP31-201ENST00000411144 127 ntBASIC3.4□□□□□ -1.87
ZNF560Q96MR9 AC068533.2-201ENST00000411872 306 ntBASIC3.4□□□□□ -1.87
ZNF560Q96MR9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.4□□□□□ -1.87
ZNF560Q96MR9 YPEL5P1-201ENST00000419731 367 ntBASIC3.4□□□□□ -1.87
ZNF560Q96MR9 TRIAP1P1-201ENST00000427062 225 ntBASIC3.4□□□□□ -1.87
ZNF560Q96MR9 AL590233.1-201ENST00000430017 456 ntBASIC3.4□□□□□ -1.87
ZNF560Q96MR9 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.4□□□□□ -1.87
ZNF560Q96MR9 MUPP-201ENST00000438111 566 ntBASIC3.4□□□□□ -1.87
ZNF560Q96MR9 ISCA1P2-201ENST00000438679 421 ntBASIC3.4□□□□□ -1.87
ZNF560Q96MR9 SSXP4-201ENST00000451349 245 ntBASIC3.4□□□□□ -1.87
ZNF560Q96MR9 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.4□□□□□ -1.87
ZNF560Q96MR9 RPS27AP1-201ENST00000475545 471 ntBASIC3.4□□□□□ -1.87
ZNF560Q96MR9 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ZNF560Q96MR9 AC006445.1-201ENST00000491925 405 ntBASIC3.4□□□□□ -1.87
ZNF560Q96MR9 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.4□□□□□ -1.87
ZNF560Q96MR9 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.4□□□□□ -1.87
ZNF560Q96MR9 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms