Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 RPL23AP31-201ENST00000456160 467 ntBASIC2.87□□□□□ -1.95
C9orf72Q96LT7 RPS29P26-201ENST00000477483 171 ntBASIC2.87□□□□□ -1.95
C9orf72Q96LT7 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
C9orf72Q96LT7 RN7SL499P-201ENST00000481141 276 ntBASIC2.87□□□□□ -1.95
C9orf72Q96LT7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.87□□□□□ -1.95
C9orf72Q96LT7 AC093767.1-201ENST00000504523 156 ntBASIC2.87□□□□□ -1.95
C9orf72Q96LT7 AC111000.2-201ENST00000507775 550 ntBASIC2.87□□□□□ -1.95
C9orf72Q96LT7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.87□□□□□ -1.95
C9orf72Q96LT7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.87□□□□□ -1.95
C9orf72Q96LT7 SNORA31.1-201ENST00000515993 133 ntBASIC2.87□□□□□ -1.95
C9orf72Q96LT7 SNORA31.5-201ENST00000516190 133 ntBASIC2.87□□□□□ -1.95
C9orf72Q96LT7 SNORA9.3-201ENST00000516383 129 ntBASIC2.87□□□□□ -1.95
C9orf72Q96LT7 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
C9orf72Q96LT7 HPRT1P3-201ENST00000539521 576 ntBASIC2.87□□□□□ -1.95
C9orf72Q96LT7 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.87□□□□□ -1.95
C9orf72Q96LT7 MTCO1P40-201ENST00000574371 625 ntBASIC2.87□□□□□ -1.95
C9orf72Q96LT7 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.87□□□□□ -1.95
C9orf72Q96LT7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.87□□□□□ -1.95
C9orf72Q96LT7 AL445493.3-201ENST00000619568 477 ntBASIC2.87□□□□□ -1.95
C9orf72Q96LT7 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.87□□□□□ -1.95
C9orf72Q96LT7 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.87□□□□□ -1.95
C9orf72Q96LT7 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.87□□□□□ -1.95
C9orf72Q96LT7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
C9orf72Q96LT7 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.87□□□□□ -1.95
C9orf72Q96LT7 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
C9orf72Q96LT7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.86□□□□□ -1.95
C9orf72Q96LT7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.86□□□□□ -1.95
C9orf72Q96LT7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
C9orf72Q96LT7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.86□□□□□ -1.95
C9orf72Q96LT7 SNORA14A-201ENST00000364773 135 ntBASIC2.86□□□□□ -1.95
C9orf72Q96LT7 RNU6-619P-201ENST00000365146 108 ntBASIC2.86□□□□□ -1.95
C9orf72Q96LT7 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.86□□□□□ -1.95
C9orf72Q96LT7 RNU6-851P-201ENST00000384565 107 ntBASIC2.86□□□□□ -1.95
C9orf72Q96LT7 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.86□□□□□ -1.95
C9orf72Q96LT7 AC092447.6-201ENST00000414578 210 ntBASIC2.86□□□□□ -1.95
C9orf72Q96LT7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.86□□□□□ -1.95
C9orf72Q96LT7 AC012497.1-201ENST00000429392 575 ntBASIC2.86□□□□□ -1.95
C9orf72Q96LT7 AC109583.1-201ENST00000432156 268 ntBASIC2.86□□□□□ -1.95
C9orf72Q96LT7 AC234064.1-201ENST00000436312 247 ntBASIC2.86□□□□□ -1.95
C9orf72Q96LT7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.86□□□□□ -1.95
C9orf72Q96LT7 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.86□□□□□ -1.95
C9orf72Q96LT7 AL500527.1-201ENST00000448532 255 ntBASIC2.86□□□□□ -1.95
C9orf72Q96LT7 MTCO3P2-201ENST00000457365 171 ntBASIC2.86□□□□□ -1.95
C9orf72Q96LT7 RNA5SP310-201ENST00000459084 116 ntBASIC2.86□□□□□ -1.95
C9orf72Q96LT7 AC025768.1-201ENST00000510057 267 ntBASIC2.86□□□□□ -1.95
C9orf72Q96LT7 AC048346.1-201ENST00000510247 144 ntBASIC2.86□□□□□ -1.95
C9orf72Q96LT7 SCGB1D5P-201ENST00000515134 247 ntBASIC2.86□□□□□ -1.95
C9orf72Q96LT7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.86□□□□□ -1.95
C9orf72Q96LT7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.86□□□□□ -1.95
C9orf72Q96LT7 ELOCP31-201ENST00000540463 467 ntBASIC2.86□□□□□ -1.95
C9orf72Q96LT7 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.86□□□□□ -1.95
C9orf72Q96LT7 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.86□□□□□ -1.95
C9orf72Q96LT7 AL391156.1-201ENST00000554965 554 ntBASIC2.86□□□□□ -1.95
C9orf72Q96LT7 AC079148.1-201ENST00000565944 819 ntBASIC2.86□□□□□ -1.95
C9orf72Q96LT7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
C9orf72Q96LT7 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.86□□□□□ -1.95
C9orf72Q96LT7 AC009220.3-201ENST00000604318 586 ntBASIC2.86□□□□□ -1.95
C9orf72Q96LT7 AC106900.2-201ENST00000604994 317 ntBASIC2.86□□□□□ -1.95
C9orf72Q96LT7 AL354696.1-201ENST00000614652 497 ntBASIC2.86□□□□□ -1.95
C9orf72Q96LT7 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.86□□□□□ -1.95
C9orf72Q96LT7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
C9orf72Q96LT7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
C9orf72Q96LT7 AL049780.3-201ENST00000624612 1583 ntBASIC2.86□□□□□ -1.95
C9orf72Q96LT7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.86□□□□□ -1.95
C9orf72Q96LT7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.85□□□□□ -1.95
C9orf72Q96LT7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
C9orf72Q96LT7 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
C9orf72Q96LT7 SNORA5B-201ENST00000363786 132 ntBASIC2.85□□□□□ -1.95
C9orf72Q96LT7 OR1L1-202ENST00000373686 1083 ntBASIC2.85□□□□□ -1.95
C9orf72Q96LT7 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.85□□□□□ -1.95
C9orf72Q96LT7 CD24P4-201ENST00000382840 243 ntBASIC2.85□□□□□ -1.95
C9orf72Q96LT7 AP002784.2-201ENST00000397300 549 ntBASIC2.85□□□□□ -1.95
C9orf72Q96LT7 AL512633.1-201ENST00000399931 655 ntBASIC2.85□□□□□ -1.95
C9orf72Q96LT7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.85□□□□□ -1.95
C9orf72Q96LT7 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.85□□□□□ -1.95
C9orf72Q96LT7 RPL31P54-201ENST00000429803 370 ntBASIC2.85□□□□□ -1.95
C9orf72Q96LT7 MTCYBP34-201ENST00000439552 670 ntBASIC2.85□□□□□ -1.95
C9orf72Q96LT7 AL645638.1-201ENST00000440519 361 ntBASIC2.85□□□□□ -1.95
C9orf72Q96LT7 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.85□□□□□ -1.95
C9orf72Q96LT7 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.85□□□□□ -1.95
C9orf72Q96LT7 MTND2P19-201ENST00000449129 1012 ntBASIC2.85□□□□□ -1.95
C9orf72Q96LT7 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.85□□□□□ -1.95
C9orf72Q96LT7 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.85□□□□□ -1.95
C9orf72Q96LT7 RPS27AP9-201ENST00000477681 438 ntBASIC2.85□□□□□ -1.95
C9orf72Q96LT7 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.85□□□□□ -1.95
C9orf72Q96LT7 AC112518.2-201ENST00000508565 425 ntBASIC2.85□□□□□ -1.95
C9orf72Q96LT7 AC026801.2-201ENST00000515352 425 ntBASIC2.85□□□□□ -1.95
C9orf72Q96LT7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.85□□□□□ -1.95
C9orf72Q96LT7 SETP2-201ENST00000553886 926 ntBASIC2.85□□□□□ -1.95
C9orf72Q96LT7 FAM60BP-201ENST00000578364 658 ntBASIC2.85□□□□□ -1.95
C9orf72Q96LT7 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
C9orf72Q96LT7 MIR3605-201ENST00000583214 100 ntBASIC2.85□□□□□ -1.95
C9orf72Q96LT7 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.85□□□□□ -1.95
C9orf72Q96LT7 AC096947.1-201ENST00000603233 470 ntBASIC2.85□□□□□ -1.95
C9orf72Q96LT7 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
C9orf72Q96LT7 MIR6852-201ENST00000621699 66 ntBASIC2.85□□□□□ -1.95
C9orf72Q96LT7 AP003122.6-201ENST00000623831 495 ntBASIC2.85□□□□□ -1.95
C9orf72Q96LT7 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.85□□□□□ -1.95
C9orf72Q96LT7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.85□□□□□ -1.95
C9orf72Q96LT7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms