Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 FGF7P3-201ENST00000454645 303 ntBASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 snoU109.4-201ENST00000458953 143 ntBASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 SRRM1P2-201ENST00000464531 1192 ntBASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 RPS26P28-201ENST00000470806 348 ntBASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 AC104619.4-201ENST00000510773 249 ntBASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 SNORA18.6-201ENST00000516792 115 ntBASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 SCARNA14-201ENST00000516903 136 ntBASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 AC107016.1-201ENST00000550463 337 ntBASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 SETP2-201ENST00000553886 926 ntBASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 AL157394.1-201ENST00000562983 1224 ntBASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 AC010546.1-201ENST00000569391 485 ntBASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 AC034268.2-201ENST00000571784 482 ntBASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 AL049634.3-201ENST00000604968 457 ntBASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 AC010149.2-201ENST00000637608 315 ntBASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 AC027287.1-201ENST00000553115 1453 ntBASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM43Q96BQ3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AL672167.1-203ENST00000641299 2975 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AC095050.2-201ENST00000510748 1458 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 U3.20-201ENST00000390909 217 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 RPL7P25-201ENST00000404151 721 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AL121834.1-202ENST00000404494 277 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 RN7SKP167-201ENST00000411047 285 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 RPL36AP10-201ENST00000421785 322 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AL391219.1-201ENST00000422570 483 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AL159987.2-201ENST00000432754 307 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AL031667.1-201ENST00000440222 725 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AC112653.1-201ENST00000443851 386 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AL645939.1-201ENST00000453429 797 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AL591473.1-201ENST00000464297 313 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AC106707.2-201ENST00000484182 374 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 MTND2P33-201ENST00000506452 1031 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 RNU6-201P-201ENST00000517100 61 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 YPEL5P3-201ENST00000547227 352 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AC091516.1-201ENST00000549191 703 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AC009063.1-201ENST00000563342 702 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AC011468.4-201ENST00000603942 409 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AC090578.1-201ENST00000604955 591 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AL021997.1-201ENST00000605757 193 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AC091834.1-201ENST00000614543 472 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AC019278.1-201ENST00000623516 479 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AC099654.13-201ENST00000639774 207 ntBASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
TRIM43Q96BQ3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 RNU6-259P-201ENST00000383999 107 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 Y_RNA.582-201ENST00000391023 95 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 RNU4-78P-201ENST00000410940 126 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 ELOCP17-201ENST00000414751 326 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 C1DP2-201ENST00000418167 426 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 RPS12P23-201ENST00000419579 400 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 AC104651.1-201ENST00000427559 735 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 OR2B8P-201ENST00000432841 938 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 RPS26P2-201ENST00000440331 348 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 PGBD4P3-201ENST00000440731 581 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 MTND6P13-201ENST00000443510 523 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 NDUFS5P3-201ENST00000450668 321 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 AL353691.1-201ENST00000451332 387 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 RPS4XP18-201ENST00000495480 763 ntBASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM43Q96BQ3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms