Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC47Q96A33 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CCDC47Q96A33 RN7SL601P-201ENST00000471221 293 ntBASIC3.53□□□□□ -1.84
CCDC47Q96A33 SETP11-201ENST00000473027 690 ntBASIC3.53□□□□□ -1.84
CCDC47Q96A33 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC47Q96A33 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CCDC47Q96A33 AC023424.2-201ENST00000493479 777 ntBASIC3.53□□□□□ -1.84
CCDC47Q96A33 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC47Q96A33 RNU6-56P-201ENST00000516986 93 ntBASIC3.53□□□□□ -1.84
CCDC47Q96A33 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC47Q96A33 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.53□□□□□ -1.84
CCDC47Q96A33 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC47Q96A33 MIR2682-201ENST00000580305 110 ntBASIC3.53□□□□□ -1.84
CCDC47Q96A33 MIR4506-201ENST00000584693 77 ntBASIC3.53□□□□□ -1.84
CCDC47Q96A33 AC013444.2-201ENST00000603317 787 ntBASIC3.53□□□□□ -1.84
CCDC47Q96A33 AC097504.2-201ENST00000608088 454 ntBASIC3.53□□□□□ -1.84
CCDC47Q96A33 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC47Q96A33 AC084824.4-201ENST00000620106 731 ntBASIC3.53□□□□□ -1.84
CCDC47Q96A33 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC47Q96A33 AL161637.1-201ENST00000622380 412 ntBASIC3.53□□□□□ -1.84
CCDC47Q96A33 AP003476.1-201ENST00000623984 516 ntBASIC3.53□□□□□ -1.84
CCDC47Q96A33 MTCO1P12-201ENST00000414273 1543 ntBASIC3.53□□□□□ -1.84
CCDC47Q96A33 AC099654.7-201ENST00000635788 2127 ntBASIC3.53□□□□□ -1.84
CCDC47Q96A33 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC47Q96A33 AP005901.5-201ENST00000545779 1796 ntBASIC3.53□□□□□ -1.84
CCDC47Q96A33 AC008264.2-201ENST00000610193 3731 ntBASIC3.53□□□□□ -1.85
CCDC47Q96A33 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC47Q96A33 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC47Q96A33 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CCDC47Q96A33 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC47Q96A33 RNU6-216P-201ENST00000363282 104 ntBASIC3.52□□□□□ -1.85
CCDC47Q96A33 MIR449B-201ENST00000384995 97 ntBASIC3.52□□□□□ -1.85
CCDC47Q96A33 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CCDC47Q96A33 AL031121.1-201ENST00000406553 254 ntBASIC3.52□□□□□ -1.85
CCDC47Q96A33 AC245054.2-201ENST00000415639 319 ntBASIC3.52□□□□□ -1.85
CCDC47Q96A33 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC47Q96A33 AC069157.1-201ENST00000421749 137 ntBASIC3.52□□□□□ -1.85
CCDC47Q96A33 BEND7P1-201ENST00000422058 457 ntBASIC3.52□□□□□ -1.85
CCDC47Q96A33 RPL27AP8-201ENST00000424277 446 ntBASIC3.52□□□□□ -1.85
CCDC47Q96A33 AL590233.1-201ENST00000430017 456 ntBASIC3.52□□□□□ -1.85
CCDC47Q96A33 FAM133DP-201ENST00000464802 691 ntBASIC3.52□□□□□ -1.85
CCDC47Q96A33 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC47Q96A33 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC47Q96A33 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC47Q96A33 RNA5SP385-201ENST00000515947 110 ntBASIC3.52□□□□□ -1.85
CCDC47Q96A33 DUXAP2-201ENST00000519198 589 ntBASIC3.52□□□□□ -1.85
CCDC47Q96A33 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC47Q96A33 MTND1P36-201ENST00000522384 936 ntBASIC3.52□□□□□ -1.85
CCDC47Q96A33 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC47Q96A33 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC47Q96A33 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC47Q96A33 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC47Q96A33 AC104072.1-201ENST00000568817 668 ntBASIC3.52□□□□□ -1.85
CCDC47Q96A33 OR4K8P-201ENST00000578842 1048 ntBASIC3.52□□□□□ -1.85
CCDC47Q96A33 RN7SL339P-201ENST00000580597 296 ntBASIC3.52□□□□□ -1.85
CCDC47Q96A33 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC47Q96A33 AL109618.2-201ENST00000605527 211 ntBASIC3.52□□□□□ -1.85
CCDC47Q96A33 AP003485.1-201ENST00000625093 753 ntBASIC3.52□□□□□ -1.85
CCDC47Q96A33 MIR1322-201ENST00000638013 71 ntBASIC3.52□□□□□ -1.85
CCDC47Q96A33 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC47Q96A33 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC47Q96A33 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC47Q96A33 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC47Q96A33 AC007742.1-201ENST00000425789 329 ntBASIC3.51□□□□□ -1.85
CCDC47Q96A33 AC024082.2-201ENST00000434771 238 ntBASIC3.51□□□□□ -1.85
CCDC47Q96A33 ELOCP26-201ENST00000436067 329 ntBASIC3.51□□□□□ -1.85
CCDC47Q96A33 GTF2IP7-202ENST00000436677 309 ntBASIC3.51□□□□□ -1.85
CCDC47Q96A33 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC47Q96A33 AC108734.1-201ENST00000439549 399 ntBASIC3.51□□□□□ -1.85
CCDC47Q96A33 AL121871.1-201ENST00000443413 436 ntBASIC3.51□□□□□ -1.85
CCDC47Q96A33 UQCRHP3-201ENST00000451503 251 ntBASIC3.51□□□□□ -1.85
CCDC47Q96A33 AP001992.1-205ENST00000462248 379 ntBASIC3.51□□□□□ -1.85
CCDC47Q96A33 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CCDC47Q96A33 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC47Q96A33 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC47Q96A33 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC47Q96A33 AC087808.1-201ENST00000520501 361 ntBASIC3.51□□□□□ -1.85
CCDC47Q96A33 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC47Q96A33 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC47Q96A33 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.51□□□□□ -1.85
CCDC47Q96A33 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC47Q96A33 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.51□□□□□ -1.85
CCDC47Q96A33 MIR4637-201ENST00000582405 84 ntBASIC3.51□□□□□ -1.85
CCDC47Q96A33 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC47Q96A33 AC015688.2-201ENST00000584523 262 ntBASIC3.51□□□□□ -1.85
CCDC47Q96A33 RPL23AP78-201ENST00000599928 470 ntBASIC3.51□□□□□ -1.85
CCDC47Q96A33 AL390838.2-201ENST00000602394 274 ntBASIC3.51□□□□□ -1.85
CCDC47Q96A33 TUG1_1.1-201ENST00000610654 145 ntBASIC3.51□□□□□ -1.85
CCDC47Q96A33 AC120349.2-201ENST00000625002 298 ntBASIC3.51□□□□□ -1.85
CCDC47Q96A33 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC47Q96A33 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC47Q96A33 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.51□□□□□ -1.85
CCDC47Q96A33 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC47Q96A33 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCDC47Q96A33 AC009812.4-201ENST00000569134 1805 ntBASIC3.51□□□□□ -1.85
CCDC47Q96A33 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
CCDC47Q96A33 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC47Q96A33 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.5□□□□□ -1.85
CCDC47Q96A33 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CCDC47Q96A33 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms