Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.3□□□□□ -1.88
PTP4A1Q93096 AC099563.1-201ENST00000456086 418 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.3□□□□□ -1.88
PTP4A1Q93096 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.3□□□□□ -1.88
PTP4A1Q93096 AC068724.1-201ENST00000487100 792 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 AP001025.2-201ENST00000490908 477 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 AC021146.5-201ENST00000503544 545 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 AC112198.1-201ENST00000505369 1220 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.3□□□□□ -1.88
PTP4A1Q93096 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.3□□□□□ -1.88
PTP4A1Q93096 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.3□□□□□ -1.88
PTP4A1Q93096 SCARNA15.2-201ENST00000516409 127 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 RNU6-352P-201ENST00000516908 107 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 RNU6-798P-201ENST00000516912 103 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.3□□□□□ -1.88
PTP4A1Q93096 AC011602.1-201ENST00000546484 331 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 AC124947.2-202ENST00000552735 133 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 TRAV37-201ENST00000553906 342 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.3□□□□□ -1.88
PTP4A1Q93096 MTCO3P24-201ENST00000572729 782 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.3□□□□□ -1.88
PTP4A1Q93096 VN1R82P-201ENST00000601481 356 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 AL592221.1-201ENST00000605266 382 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 RNU6-88P-201ENST00000606801 100 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 AL136370.1-201ENST00000608166 691 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.3□□□□□ -1.88
PTP4A1Q93096 AC090912.3-201ENST00000609775 533 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.3□□□□□ -1.88
PTP4A1Q93096 AC079228.1-201ENST00000624774 1049 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.3□□□□□ -1.88
PTP4A1Q93096 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTP4A1Q93096 AC007496.3-201ENST00000624987 3443 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
PTP4A1Q93096 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.3□□□□□ -1.88
PTP4A1Q93096 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PTP4A1Q93096 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
PTP4A1Q93096 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PTP4A1Q93096 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PTP4A1Q93096 RNU6-343P-201ENST00000364709 104 ntBASIC3.29□□□□□ -1.88
PTP4A1Q93096 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PTP4A1Q93096 MIR514A1-201ENST00000385133 98 ntBASIC3.29□□□□□ -1.88
PTP4A1Q93096 RNA5SP252-201ENST00000391131 119 ntBASIC3.29□□□□□ -1.88
PTP4A1Q93096 MTCO2P8-201ENST00000412213 658 ntBASIC3.29□□□□□ -1.88
PTP4A1Q93096 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.29□□□□□ -1.88
PTP4A1Q93096 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.29□□□□□ -1.88
PTP4A1Q93096 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.29□□□□□ -1.88
PTP4A1Q93096 RPL35AP22-201ENST00000436855 335 ntBASIC3.29□□□□□ -1.88
PTP4A1Q93096 AC091862.1-201ENST00000438016 1100 ntBASIC3.29□□□□□ -1.88
PTP4A1Q93096 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.29□□□□□ -1.88
PTP4A1Q93096 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.29□□□□□ -1.88
PTP4A1Q93096 RPL30P9-201ENST00000465586 330 ntBASIC3.29□□□□□ -1.88
PTP4A1Q93096 AC034236.1-201ENST00000469891 373 ntBASIC3.29□□□□□ -1.88
PTP4A1Q93096 AL049874.1-201ENST00000489560 388 ntBASIC3.29□□□□□ -1.88
PTP4A1Q93096 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.29□□□□□ -1.88
PTP4A1Q93096 AC093281.2-201ENST00000510153 597 ntBASIC3.29□□□□□ -1.88
PTP4A1Q93096 SNORA31.22-201ENST00000517204 135 ntBASIC3.29□□□□□ -1.88
PTP4A1Q93096 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.29□□□□□ -1.88
PTP4A1Q93096 CASP1P1-201ENST00000526345 212 ntBASIC3.29□□□□□ -1.88
PTP4A1Q93096 AP000867.2-201ENST00000532468 320 ntBASIC3.29□□□□□ -1.88
PTP4A1Q93096 ACTR3BP3-201ENST00000565577 979 ntBASIC3.29□□□□□ -1.88
PTP4A1Q93096 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.29□□□□□ -1.88
PTP4A1Q93096 AC005951.1-201ENST00000576706 485 ntBASIC3.29□□□□□ -1.88
PTP4A1Q93096 MIR3160-1-201ENST00000577972 85 ntBASIC3.29□□□□□ -1.88
PTP4A1Q93096 MTCO2P2-201ENST00000591258 225 ntBASIC3.29□□□□□ -1.88
PTP4A1Q93096 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.29□□□□□ -1.88
PTP4A1Q93096 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.29□□□□□ -1.88
PTP4A1Q93096 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.29□□□□□ -1.88
PTP4A1Q93096 AC091564.4-201ENST00000533934 2194 ntBASIC3.29□□□□□ -1.88
PTP4A1Q93096 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.29□□□□□ -1.88
PTP4A1Q93096 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PTP4A1Q93096 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.29□□□□□ -1.88
PTP4A1Q93096 AC007656.2-201ENST00000624902 4547 ntBASIC3.29□□□□□ -1.88
PTP4A1Q93096 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PTP4A1Q93096 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PTP4A1Q93096 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.28□□□□□ -1.88
PTP4A1Q93096 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PTP4A1Q93096 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PTP4A1Q93096 AC092435.3-201ENST00000565538 3654 ntBASIC3.28□□□□□ -1.88
PTP4A1Q93096 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.28□□□□□ -1.88
PTP4A1Q93096 AP000776.1-201ENST00000530032 1663 ntBASIC3.28□□□□□ -1.88
PTP4A1Q93096 MIR30B-201ENST00000384850 88 ntBASIC3.28□□□□□ -1.88
PTP4A1Q93096 MIR320C1-201ENST00000408566 88 ntBASIC3.28□□□□□ -1.88
PTP4A1Q93096 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
PTP4A1Q93096 RNA5SP293-201ENST00000410527 113 ntBASIC3.28□□□□□ -1.88
PTP4A1Q93096 RNU6-516P-201ENST00000411381 104 ntBASIC3.28□□□□□ -1.88
PTP4A1Q93096 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.28□□□□□ -1.88
PTP4A1Q93096 SPA17P1-201ENST00000416656 452 ntBASIC3.28□□□□□ -1.88
PTP4A1Q93096 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.28□□□□□ -1.88
PTP4A1Q93096 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.28□□□□□ -1.88
PTP4A1Q93096 MTCO2P23-201ENST00000425216 680 ntBASIC3.28□□□□□ -1.88
PTP4A1Q93096 RPL7P2-201ENST00000427639 268 ntBASIC3.28□□□□□ -1.88
PTP4A1Q93096 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.28□□□□□ -1.88
PTP4A1Q93096 FCF1P3-201ENST00000496394 590 ntBASIC3.28□□□□□ -1.88
PTP4A1Q93096 RNA5SP380-201ENST00000517190 98 ntBASIC3.28□□□□□ -1.88
PTP4A1Q93096 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.28□□□□□ -1.88
PTP4A1Q93096 NDUFB9P3-201ENST00000521269 501 ntBASIC3.28□□□□□ -1.88
PTP4A1Q93096 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.28□□□□□ -1.88
PTP4A1Q93096 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.28□□□□□ -1.88
PTP4A1Q93096 AC006518.1-201ENST00000541449 943 ntBASIC3.28□□□□□ -1.88
PTP4A1Q93096 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms