Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 CYCSP30-201ENST00000546447 172 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 AL121603.1-201ENST00000553815 142 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 AL157394.1-201ENST00000562983 1224 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 MTND1P15-201ENST00000579262 949 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 AC012417.1-201ENST00000582307 1039 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 XIAPP1-201ENST00000603162 600 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 SNORA51-201ENST00000606420 132 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 AC006566.1-201ENST00000608943 513 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 Z99129.1-201ENST00000612510 255 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 AL392088.2-201ENST00000637607 285 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 AC095050.2-201ENST00000510748 1458 ntBASIC4.04□□□□□ -1.76
HMGB4Q8WW32 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.04□□□□□ -1.76
HMGB4Q8WW32 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AL592182.3-201ENST00000642132 3304 ntBASIC4.03□□□□□ -1.76
HMGB4Q8WW32 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 RNU6-1155P-201ENST00000363554 107 ntBASIC4.03□□□□□ -1.76
HMGB4Q8WW32 RNU6-629P-201ENST00000384061 103 ntBASIC4.03□□□□□ -1.76
HMGB4Q8WW32 MIR7-3-201ENST00000384898 110 ntBASIC4.03□□□□□ -1.76
HMGB4Q8WW32 CCNG1P1-201ENST00000406783 885 ntBASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AC244505.5-201ENST00000443639 207 ntBASIC4.03□□□□□ -1.76
HMGB4Q8WW32 RPL17P49-201ENST00000443728 411 ntBASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AC010655.1-201ENST00000449336 292 ntBASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AC099563.1-201ENST00000456086 418 ntBASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AC055855.1-201ENST00000489563 579 ntBASIC4.03□□□□□ -1.76
HMGB4Q8WW32 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 RNU7-143P-201ENST00000516781 65 ntBASIC4.03□□□□□ -1.76
HMGB4Q8WW32 RNU6-352P-201ENST00000516908 107 ntBASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AC022616.6-201ENST00000520479 119 ntBASIC4.03□□□□□ -1.76
HMGB4Q8WW32 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AC123904.2-201ENST00000548059 300 ntBASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AC091516.1-201ENST00000549191 703 ntBASIC4.03□□□□□ -1.76
HMGB4Q8WW32 HMGN1P30-201ENST00000589286 268 ntBASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AC006254.3-201ENST00000603353 884 ntBASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AL136363.2-201ENST00000604173 851 ntBASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AC091167.4-201ENST00000605079 184 ntBASIC4.03□□□□□ -1.76
HMGB4Q8WW32 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AC084035.1-201ENST00000634543 607 ntBASIC4.03□□□□□ -1.76
HMGB4Q8WW32 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.03□□□□□ -1.76
HMGB4Q8WW32 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
HMGB4Q8WW32 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 ZNF285B-201ENST00000561698 1767 ntBASIC4.02□□□□□ -1.77
HMGB4Q8WW32 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 RNU6-335P-201ENST00000364563 113 ntBASIC4.02□□□□□ -1.77
HMGB4Q8WW32 RNA5SP97-201ENST00000365006 84 ntBASIC4.02□□□□□ -1.77
HMGB4Q8WW32 FCF1P10-201ENST00000407590 479 ntBASIC4.02□□□□□ -1.77
HMGB4Q8WW32 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 AC093578.1-201ENST00000415219 368 ntBASIC4.02□□□□□ -1.77
HMGB4Q8WW32 RPS7P15-201ENST00000415804 584 ntBASIC4.02□□□□□ -1.77
HMGB4Q8WW32 AC099677.1-201ENST00000420575 175 ntBASIC4.02□□□□□ -1.77
HMGB4Q8WW32 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 RPS17P13-201ENST00000448974 407 ntBASIC4.02□□□□□ -1.77
HMGB4Q8WW32 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 RPL23AP41-201ENST00000484754 458 ntBASIC4.02□□□□□ -1.77
HMGB4Q8WW32 NDUFB4P2-201ENST00000509515 391 ntBASIC4.02□□□□□ -1.77
HMGB4Q8WW32 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 AC022880.1-201ENST00000534017 973 ntBASIC4.02□□□□□ -1.77
HMGB4Q8WW32 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 AC018630.1-201ENST00000541376 925 ntBASIC4.02□□□□□ -1.77
HMGB4Q8WW32 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGB4Q8WW32 SNRPGP15-201ENST00000600149 222 ntBASIC4.02□□□□□ -1.77
HMGB4Q8WW32 AC011468.4-201ENST00000603942 409 ntBASIC4.02□□□□□ -1.77
HMGB4Q8WW32 AC090578.1-201ENST00000604955 591 ntBASIC4.02□□□□□ -1.77
HMGB4Q8WW32 NDUFA8P1-201ENST00000605525 367 ntBASIC4.02□□□□□ -1.77
HMGB4Q8WW32 RNU6-87P-201ENST00000607561 108 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 159.4 ms