Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 AL590396.4-201ENST00000636779 956 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 PABPC1P7-201ENST00000413177 1513 ntBASIC3.34□□□□□ -1.87
SH3TC1Q8TE82 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.34□□□□□ -1.88
SH3TC1Q8TE82 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 AC004925.1-201ENST00000624256 2706 ntBASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 FAM35CP-201ENST00000554755 2470 ntBASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 U6.112-201ENST00000384129 70 ntBASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 SNORA67.4-201ENST00000384688 142 ntBASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 DSTNP4-201ENST00000399472 474 ntBASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 AL590004.2-201ENST00000404787 371 ntBASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 RPL36P19-201ENST00000430744 301 ntBASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 MYL8P-204ENST00000431574 518 ntBASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 HIGD1AP11-201ENST00000438361 280 ntBASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 AC128713.1-201ENST00000471495 306 ntBASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 PRELID3BP4-201ENST00000515476 571 ntBASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 SNORA9.3-201ENST00000516383 129 ntBASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 AC091544.4-201ENST00000555268 342 ntBASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 AC012182.1-201ENST00000570133 895 ntBASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 MTCO1P6-201ENST00000481192 1384 ntBASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.33□□□□□ -1.88
SH3TC1Q8TE82 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 RNA5SP508-201ENST00000411327 119 ntBASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 NECAP1P2-201ENST00000455668 727 ntBASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 HSPE1P6-201ENST00000479457 291 ntBASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 AC092902.1-201ENST00000486999 259 ntBASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 RNU5A-7P-201ENST00000515979 116 ntBASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 AC109635.4-202ENST00000531666 412 ntBASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 AC004217.3-201ENST00000551552 878 ntBASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 AC006116.7-201ENST00000590141 756 ntBASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 AL109653.1-201ENST00000603091 248 ntBASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 AC012119.1-201ENST00000603184 222 ntBASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 YWHAQP7-201ENST00000603536 658 ntBASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 AC005046.1-201ENST00000608515 625 ntBASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 AC092574.1-201ENST00000609771 420 ntBASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 AL390240.1-201ENST00000612950 384 ntBASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 AC068880.4-201ENST00000623082 495 ntBASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 AC025263.3-201ENST00000622965 1396 ntBASIC3.32□□□□□ -1.88
SH3TC1Q8TE82 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 AP000526.1-201ENST00000603308 1388 ntBASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 AL121972.1-201ENST00000402023 252 ntBASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 BMS1P22-201ENST00000414726 313 ntBASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 RPL7P46-201ENST00000425129 740 ntBASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 OR51B8P-201ENST00000449892 769 ntBASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 FDX1P2-201ENST00000450769 375 ntBASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 RPL23AP31-201ENST00000456160 467 ntBASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 RNU1-61P-201ENST00000516107 151 ntBASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 AP001646.1-201ENST00000527936 915 ntBASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 AC124293.1-201ENST00000530034 493 ntBASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 NIFKP8-201ENST00000560500 874 ntBASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 MIR4504-201ENST00000577413 92 ntBASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 MIR4769-201ENST00000584126 77 ntBASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 MAGOH2P-202ENST00000584384 429 ntBASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 AC078899.3-201ENST00000599065 212 ntBASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 AL590282.1-201ENST00000610379 1136 ntBASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
SH3TC1Q8TE82 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
SH3TC1Q8TE82 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SH3TC1Q8TE82 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SH3TC1Q8TE82 RNU6-932P-201ENST00000391108 106 ntBASIC3.3□□□□□ -1.88
SH3TC1Q8TE82 RNA5SP129-201ENST00000410276 118 ntBASIC3.3□□□□□ -1.88
SH3TC1Q8TE82 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms