Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.98□□□□□ -1.93
C9orf40Q8IXQ3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.98□□□□□ -1.93
C9orf40Q8IXQ3 EEF1B2P4-201ENST00000551398 348 ntBASIC2.98□□□□□ -1.93
C9orf40Q8IXQ3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.98□□□□□ -1.93
C9orf40Q8IXQ3 AC234772.3-201ENST00000602277 528 ntBASIC2.98□□□□□ -1.93
C9orf40Q8IXQ3 YPEL5P2-201ENST00000605553 359 ntBASIC2.98□□□□□ -1.93
C9orf40Q8IXQ3 AC107952.2-201ENST00000606048 486 ntBASIC2.98□□□□□ -1.93
C9orf40Q8IXQ3 AL442067.2-201ENST00000614033 363 ntBASIC2.98□□□□□ -1.93
C9orf40Q8IXQ3 AC231657.1-201ENST00000624313 397 ntBASIC2.98□□□□□ -1.93
C9orf40Q8IXQ3 AC091925.2-201ENST00000625059 256 ntBASIC2.98□□□□□ -1.93
C9orf40Q8IXQ3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
C9orf40Q8IXQ3 GABPAP-201ENST00000419271 1356 ntBASIC2.98□□□□□ -1.93
C9orf40Q8IXQ3 MTND5P24-201ENST00000438892 1767 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AL079343.1-201ENST00000572358 1771 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 Y_RNA.333-201ENST00000365274 102 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 RNU6-83P-201ENST00000384568 112 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 MIR1284-201ENST00000408337 120 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AC007390.1-201ENST00000415722 356 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 RPL22P18-201ENST00000417197 377 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 TOMM22P1-201ENST00000418578 312 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 BX890604.2-201ENST00000427883 474 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 RPL21P112-201ENST00000434403 463 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 RPS25P9-201ENST00000435591 252 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AC006028.1-201ENST00000438379 402 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AL138799.3-201ENST00000438968 350 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 HMGN1P18-201ENST00000457642 277 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AC109925.1-201ENST00000478069 331 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 RPL7P18-201ENST00000478965 734 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AC021146.8-201ENST00000507455 733 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AC010625.1-201ENST00000511296 403 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 OR5AK1P-201ENST00000524837 922 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AP004242.1-201ENST00000533701 349 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AC004024.1-201ENST00000549244 247 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AC103881.1-201ENST00000603476 538 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AL158042.1-201ENST00000605338 460 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AC006270.3-201ENST00000605967 1036 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AC080013.4-201ENST00000607624 649 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AC100793.4-201ENST00000613683 429 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 uc_338.25-201ENST00000613756 156 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AC025588.4-201ENST00000615802 908 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AC018755.4-201ENST00000619715 454 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AP000484.1-201ENST00000620067 1252 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 MIR3651-201ENST00000630427 90 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 AC073346.2-201ENST00000624724 2058 ntBASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
C9orf40Q8IXQ3 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 FAM133CP-201ENST00000332869 704 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 SNORA38.1-201ENST00000364172 131 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 SNORA7.2-201ENST00000364446 145 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 RNA5SP189-201ENST00000364920 115 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 RPL23AP29-201ENST00000397284 453 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 DHFRP6-201ENST00000401776 268 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 RNU4-47P-201ENST00000410876 114 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 HMGB3P23-201ENST00000414981 585 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AL008987.1-201ENST00000415528 237 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 HIGD1AP15-201ENST00000416198 280 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC006960.1-201ENST00000419980 153 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AL353678.1-201ENST00000422735 741 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 ELOCP13-201ENST00000443934 329 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC115115.1-201ENST00000449927 248 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC005297.2-201ENST00000450430 606 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AL445669.2-201ENST00000454425 421 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 RN7SL863P-201ENST00000462370 296 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 HMGB1P25-201ENST00000468402 607 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 AC090453.1-201ENST00000495560 436 ntBASIC2.96□□□□□ -1.94
C9orf40Q8IXQ3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms