Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 UBE2V1P5-201ENST00000440070 405 ntBASIC1.5□□□□□ -2.17
VPS13CQ709C8 HMGN1P7-201ENST00000491722 313 ntBASIC1.5□□□□□ -2.17
VPS13CQ709C8 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.5□□□□□ -2.17
VPS13CQ709C8 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS13CQ709C8 AL627309.6-201ENST00000606857 840 ntBASIC1.5□□□□□ -2.17
VPS13CQ709C8 AP001148.1-201ENST00000624124 2359 ntBASIC1.5□□□□□ -2.17
VPS13CQ709C8 NDUFB4P5-201ENST00000415445 361 ntBASIC1.5□□□□□ -2.17
VPS13CQ709C8 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS13CQ709C8 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS13CQ709C8 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
VPS13CQ709C8 PTP4A1P6-201ENST00000531034 478 ntBASIC1.5□□□□□ -2.17
VPS13CQ709C8 AL049840.6-202ENST00000603373 279 ntBASIC1.5□□□□□ -2.17
VPS13CQ709C8 TMEM161BP1-201ENST00000457388 1457 ntBASIC1.49□□□□□ -2.17
VPS13CQ709C8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13CQ709C8 CDC42P1-201ENST00000456658 548 ntBASIC1.49□□□□□ -2.17
VPS13CQ709C8 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13CQ709C8 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC1.49□□□□□ -2.17
VPS13CQ709C8 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.49□□□□□ -2.17
VPS13CQ709C8 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
VPS13CQ709C8 MIR1183-201ENST00000408856 89 ntBASIC1.49□□□□□ -2.17
VPS13CQ709C8 AC073136.2-201ENST00000417282 849 ntBASIC1.49□□□□□ -2.17
VPS13CQ709C8 AC107393.1-201ENST00000512403 346 ntBASIC1.49□□□□□ -2.17
VPS13CQ709C8 HMGB1P1-201ENST00000522557 636 ntBASIC1.49□□□□□ -2.17
VPS13CQ709C8 AL122125.1-201ENST00000616999 600 ntBASIC1.49□□□□□ -2.17
VPS13CQ709C8 AL355578.1-201ENST00000607405 1328 ntBASIC1.49□□□□□ -2.17
VPS13CQ709C8 WWP1P1-201ENST00000466609 2769 ntBASIC1.49□□□□□ -2.17
VPS13CQ709C8 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC1.49□□□□□ -2.17
VPS13CQ709C8 MIR6073-201ENST00000352083 89 ntBASIC1.49□□□□□ -2.17
VPS13CQ709C8 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.49□□□□□ -2.17
VPS13CQ709C8 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.49□□□□□ -2.17
VPS13CQ709C8 RNU1-123P-201ENST00000458950 160 ntBASIC1.49□□□□□ -2.17
VPS13CQ709C8 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC1.49□□□□□ -2.17
VPS13CQ709C8 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
VPS13CQ709C8 AL133412.1-201ENST00000380194 2992 ntBASIC1.48□□□□□ -2.17
VPS13CQ709C8 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.48□□□□□ -2.17
VPS13CQ709C8 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
VPS13CQ709C8 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
VPS13CQ709C8 MAPK10-266ENST00000641066 6555 ntBASIC1.48□□□□□ -2.17
VPS13CQ709C8 RNA5SP38-201ENST00000410750 119 ntBASIC1.48□□□□□ -2.17
VPS13CQ709C8 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
VPS13CQ709C8 FAM92A1P1-201ENST00000528023 890 ntBASIC1.48□□□□□ -2.17
VPS13CQ709C8 AC010297.1-201ENST00000623948 149 ntBASIC1.48□□□□□ -2.17
VPS13CQ709C8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
VPS13CQ709C8 RNA5SP37-201ENST00000365420 130 ntBASIC1.48□□□□□ -2.17
VPS13CQ709C8 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.48□□□□□ -2.17
VPS13CQ709C8 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.48□□□□□ -2.17
VPS13CQ709C8 AL035411.2-201ENST00000604022 421 ntBASIC1.48□□□□□ -2.17
VPS13CQ709C8 AC013562.2-201ENST00000611632 603 ntBASIC1.48□□□□□ -2.17
VPS13CQ709C8 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.48□□□□□ -2.17
VPS13CQ709C8 MTND4P23-201ENST00000447723 1363 ntBASIC1.48□□□□□ -2.17
VPS13CQ709C8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
VPS13CQ709C8 MTCO3P31-201ENST00000405526 789 ntBASIC1.48□□□□□ -2.17
VPS13CQ709C8 RNU2-20P-201ENST00000410425 191 ntBASIC1.48□□□□□ -2.17
VPS13CQ709C8 SAR1AP4-201ENST00000429225 591 ntBASIC1.48□□□□□ -2.17
VPS13CQ709C8 MTCYBP17-201ENST00000503579 789 ntBASIC1.48□□□□□ -2.17
VPS13CQ709C8 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.48□□□□□ -2.17
VPS13CQ709C8 IGHV3-76-201ENST00000522465 295 ntBASIC1.48□□□□□ -2.17
VPS13CQ709C8 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.48□□□□□ -2.17
VPS13CQ709C8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.48□□□□□ -2.17
VPS13CQ709C8 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
VPS13CQ709C8 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
VPS13CQ709C8 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VPS13CQ709C8 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
VPS13CQ709C8 MIR625-201ENST00000385047 85 ntBASIC1.47□□□□□ -2.17
VPS13CQ709C8 AC019129.1-201ENST00000403786 261 ntBASIC1.47□□□□□ -2.17
VPS13CQ709C8 RNA5SP296-201ENST00000410523 111 ntBASIC1.47□□□□□ -2.17
VPS13CQ709C8 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC1.47□□□□□ -2.17
VPS13CQ709C8 TOMM22P6-201ENST00000465035 409 ntBASIC1.47□□□□□ -2.17
VPS13CQ709C8 USP9YP5-201ENST00000511770 630 ntBASIC1.47□□□□□ -2.17
VPS13CQ709C8 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.47□□□□□ -2.17
VPS13CQ709C8 AL645939.4-201ENST00000604495 135 ntBASIC1.47□□□□□ -2.17
VPS13CQ709C8 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS13CQ709C8 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.47□□□□□ -2.17
VPS13CQ709C8 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VPS13CQ709C8 TAS2R15P-201ENST00000390674 928 ntBASIC1.47□□□□□ -2.17
VPS13CQ709C8 NCSTNP1-201ENST00000406229 144 ntBASIC1.47□□□□□ -2.17
VPS13CQ709C8 MTND3P6-201ENST00000485242 339 ntBASIC1.47□□□□□ -2.17
VPS13CQ709C8 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.47□□□□□ -2.17
VPS13CQ709C8 AC060766.3-201ENST00000591442 263 ntBASIC1.47□□□□□ -2.17
VPS13CQ709C8 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.47□□□□□ -2.17
VPS13CQ709C8 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.47□□□□□ -2.17
VPS13CQ709C8 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS13CQ709C8 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.47□□□□□ -2.17
VPS13CQ709C8 EIF1AXP1-201ENST00000419267 435 ntBASIC1.47□□□□□ -2.17
VPS13CQ709C8 XKRY2-201ENST00000442362 1093 ntBASIC1.47□□□□□ -2.17
VPS13CQ709C8 RPS15AP36-201ENST00000492022 382 ntBASIC1.47□□□□□ -2.17
VPS13CQ709C8 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS13CQ709C8 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC1.47□□□□□ -2.17
VPS13CQ709C8 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.47□□□□□ -2.17
VPS13CQ709C8 AL845331.3-202ENST00000562856 261 ntBASIC1.47□□□□□ -2.17
VPS13CQ709C8 MIR3186-201ENST00000577404 85 ntBASIC1.47□□□□□ -2.17
VPS13CQ709C8 AC023043.3-201ENST00000593113 385 ntBASIC1.47□□□□□ -2.17
VPS13CQ709C8 AC136443.5-201ENST00000603741 370 ntBASIC1.47□□□□□ -2.17
VPS13CQ709C8 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
VPS13CQ709C8 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
VPS13CQ709C8 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
VPS13CQ709C8 MTCO1P7-201ENST00000419523 1542 ntBASIC1.46□□□□□ -2.18
VPS13CQ709C8 U3.37-201ENST00000408528 213 ntBASIC1.46□□□□□ -2.18
VPS13CQ709C8 TOMM22P1-201ENST00000418578 312 ntBASIC1.46□□□□□ -2.18
VPS13CQ709C8 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms