Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 MIR1290-201ENST00000408735 78 ntBASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 UBE2FP1-201ENST00000416536 447 ntBASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AC018630.2-202ENST00000422992 927 ntBASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 USP9YP36-201ENST00000424581 829 ntBASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 DNAJC19P4-201ENST00000440115 345 ntBASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AURKAPS2-201ENST00000454983 333 ntBASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AK3P4-201ENST00000504283 583 ntBASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AL110118.1-201ENST00000553543 400 ntBASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 MIR4293-201ENST00000584305 78 ntBASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AL606834.2-201ENST00000602954 668 ntBASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 DUXAP4-201ENST00000603046 613 ntBASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AP002360.3-201ENST00000607673 710 ntBASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AC087241.4-201ENST00000612441 480 ntBASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AL390240.1-201ENST00000612950 384 ntBASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AL138721.1-201ENST00000616756 179 ntBASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PPP4R4Q6NUP7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 RNU1-15P-201ENST00000353977 144 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 RNA5SP443-201ENST00000363083 132 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 RNU1-44P-201ENST00000384453 163 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AC110754.1-201ENST00000399740 601 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 MIR1183-201ENST00000408856 89 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AC114755.2-201ENST00000413520 361 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AC007283.2-201ENST00000424739 197 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AC104651.1-201ENST00000427559 735 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 ISCA1P6-201ENST00000427740 390 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AC005094.1-201ENST00000440420 368 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 MTCO3P45-201ENST00000443036 613 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 NANOGNBP1-201ENST00000448444 480 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AC079448.1-201ENST00000449377 373 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 RPS23P3-201ENST00000470993 430 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AC025164.1-201ENST00000496249 478 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AC010587.1-201ENST00000505809 469 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 ARL2BPP6-201ENST00000512757 439 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 RN7SKP298-201ENST00000515950 94 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 RNU6-720P-201ENST00000516363 108 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 DEFB108A-201ENST00000530110 222 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 OR4H12P-201ENST00000556269 907 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 UBE2FP2-201ENST00000566646 462 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AC091042.1-201ENST00000579213 173 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 KC877982.1-201ENST00000602313 470 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AC103710.2-201ENST00000609912 942 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AC013562.2-201ENST00000611632 603 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AL161616.1-201ENST00000611867 286 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 MIR6798-201ENST00000612887 67 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AC013476.2-201ENST00000614456 459 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AC091905.2-201ENST00000623143 306 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AC110994.2-201ENST00000635481 492 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AL392088.2-201ENST00000637607 285 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 MTND5P29-201ENST00000458676 1807 ntBASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
PPP4R4Q6NUP7 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms