Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.8□□□□□ -1.64
KRT40Q6A162 AC022655.2-201ENST00000577280 318 ntBASIC4.8□□□□□ -1.64
KRT40Q6A162 MIR5186-201ENST00000577504 120 ntBASIC4.8□□□□□ -1.64
KRT40Q6A162 NRBF2P1-201ENST00000587407 859 ntBASIC4.8□□□□□ -1.64
KRT40Q6A162 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.8□□□□□ -1.64
KRT40Q6A162 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.8□□□□□ -1.64
KRT40Q6A162 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.8□□□□□ -1.64
KRT40Q6A162 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.8□□□□□ -1.64
KRT40Q6A162 RNU6-156P-201ENST00000621869 107 ntBASIC4.8□□□□□ -1.64
KRT40Q6A162 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.8□□□□□ -1.64
KRT40Q6A162 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KRT40Q6A162 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.79□□□□□ -1.64
KRT40Q6A162 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
KRT40Q6A162 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
KRT40Q6A162 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.79□□□□□ -1.64
KRT40Q6A162 MTND4P12-201ENST00000498999 1377 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRT40Q6A162 AC092326.2-201ENST00000624772 1561 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 AL133243.3-201ENST00000617415 3004 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRT40Q6A162 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRT40Q6A162 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
KRT40Q6A162 MTCO1P17-201ENST00000411522 491 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 JKAMPP1-201ENST00000413804 919 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.79□□□□□ -1.64
KRT40Q6A162 USP9YP27-201ENST00000418455 438 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.79□□□□□ -1.64
KRT40Q6A162 AL353193.1-201ENST00000421444 268 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 COX6CP15-201ENST00000426313 211 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 NPM1P24-201ENST00000428039 894 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 YME1L1P1-201ENST00000429435 297 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 COX6B1P7-201ENST00000430845 235 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 AC002486.1-201ENST00000435098 391 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 AC104850.1-201ENST00000435940 476 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.79□□□□□ -1.64
KRT40Q6A162 ARPC3P1-201ENST00000437218 533 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 PTMAP3-201ENST00000447474 330 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 AC132479.1-201ENST00000449160 144 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 AC090453.1-201ENST00000495560 436 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.79□□□□□ -1.64
KRT40Q6A162 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.79□□□□□ -1.64
KRT40Q6A162 AC099522.1-202ENST00000514718 367 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
KRT40Q6A162 snoU109.6-201ENST00000516831 118 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.79□□□□□ -1.64
KRT40Q6A162 HSPA8P13-201ENST00000523715 472 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.79□□□□□ -1.64
KRT40Q6A162 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.79□□□□□ -1.64
KRT40Q6A162 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.79□□□□□ -1.64
KRT40Q6A162 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.79□□□□□ -1.64
KRT40Q6A162 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.79□□□□□ -1.64
KRT40Q6A162 AL512360.1-201ENST00000555346 234 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.79□□□□□ -1.64
KRT40Q6A162 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.79□□□□□ -1.64
KRT40Q6A162 AC034268.2-201ENST00000571784 482 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.79□□□□□ -1.64
KRT40Q6A162 MIR4286-201ENST00000580651 93 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 MIR3944-201ENST00000581277 108 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 AC245014.2-201ENST00000603689 287 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 AL359999.1-201ENST00000604513 294 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 AC007363.1-201ENST00000604736 620 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 AC246785.4-201ENST00000605374 287 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 AC012603.1-201ENST00000606424 528 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.79□□□□□ -1.64
KRT40Q6A162 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.79□□□□□ -1.64
KRT40Q6A162 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.79□□□□□ -1.64
KRT40Q6A162 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.79□□□□□ -1.64
KRT40Q6A162 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
KRT40Q6A162 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
KRT40Q6A162 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.79□□□□□ -1.64
KRT40Q6A162 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KRT40Q6A162 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.79□□□□□ -1.64
KRT40Q6A162 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.79□□□□□ -1.64
KRT40Q6A162 ERCC6-202ENST00000374127 1782 ntBASIC4.78□□□□□ -1.64
KRT40Q6A162 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRT40Q6A162 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRT40Q6A162 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
KRT40Q6A162 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRT40Q6A162 Y_RNA.11-201ENST00000362375 109 ntBASIC4.78□□□□□ -1.64
KRT40Q6A162 SNORA63.1-201ENST00000362493 131 ntBASIC4.78□□□□□ -1.64
KRT40Q6A162 RNA5SP513-201ENST00000364648 118 ntBASIC4.78□□□□□ -1.64
KRT40Q6A162 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRT40Q6A162 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
KRT40Q6A162 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
KRT40Q6A162 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.78□□□□□ -1.64
KRT40Q6A162 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.78□□□□□ -1.64
KRT40Q6A162 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.78□□□□□ -1.64
KRT40Q6A162 AL445584.1-201ENST00000431451 330 ntBASIC4.78□□□□□ -1.64
KRT40Q6A162 FCF1P1-201ENST00000432690 571 ntBASIC4.78□□□□□ -1.64
KRT40Q6A162 RPL23AP46-201ENST00000438548 490 ntBASIC4.78□□□□□ -1.64
KRT40Q6A162 AC073587.1-201ENST00000447093 876 ntBASIC4.78□□□□□ -1.64
KRT40Q6A162 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.78□□□□□ -1.64
KRT40Q6A162 RNA5SP246-201ENST00000458909 119 ntBASIC4.78□□□□□ -1.64
KRT40Q6A162 AP000893.1-201ENST00000474462 794 ntBASIC4.78□□□□□ -1.64
KRT40Q6A162 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.78□□□□□ -1.64
KRT40Q6A162 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.78□□□□□ -1.64
KRT40Q6A162 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.78□□□□□ -1.64
KRT40Q6A162 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.78□□□□□ -1.64
KRT40Q6A162 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms