Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 Z82195.2-201ENST00000612348 18351 ntBASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 MIR365B-201ENST00000362317 111 ntBASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 AC017007.3-201ENST00000479865 435 ntBASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 AC110588.1-201ENST00000559699 137 ntBASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 VIS1.1-201ENST00000610517 203 ntBASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.3□□□□□ -2.2
VPS13DQ5THJ4 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 AL138787.1-202ENST00000437804 898 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 MIR3670-2-201ENST00000582974 65 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 MIR3670-1-201ENST00000584160 65 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 MIR3670-3-201ENST00000584855 65 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 AL356575.1-201ENST00000603008 283 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 MIR3670-4-201ENST00000612260 65 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 HPVC1-201ENST00000629899 1198 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 MAPK10-266ENST00000641066 6555 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 AC244517.1-201ENST00000606030 2086 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 METTL21EP-201ENST00000298105 713 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 MIR1294-201ENST00000408503 142 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 AC004965.1-201ENST00000413033 213 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 RPS7P5-201ENST00000441482 581 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 AC008173.1-201ENST00000418901 264 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 HMGN2P19-201ENST00000425149 265 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 RPL23AP16-201ENST00000441715 421 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 VTA1P2-201ENST00000520205 911 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 MIR6767-201ENST00000637302 66 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 ZNF720P1-201ENST00000562403 1939 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 MIR591-201ENST00000385290 95 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 AL021407.1-201ENST00000404531 386 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 AC068446.3-201ENST00000555285 382 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 AC023043.3-201ENST00000593113 385 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 AC068790.3-201ENST00000602988 553 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 AP004372.1-201ENST00000604842 844 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 AC024560.3-201ENST00000608482 349 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 AC027514.1-201ENST00000588561 1603 ntBASIC1.29□□□□□ -2.2
VPS13DQ5THJ4 DCAF13P1-201ENST00000495256 1330 ntBASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 NDUFA5P4-201ENST00000436704 385 ntBASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 NDUFB4P6-201ENST00000436819 366 ntBASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 FAM92A1P1-201ENST00000528023 890 ntBASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 SNORA4-201ENST00000584302 138 ntBASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 AC002546.1-201ENST00000588041 2504 ntBASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 RNU7-95P-201ENST00000459222 64 ntBASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 AP000926.1-201ENST00000479573 241 ntBASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 AC090543.1-201ENST00000492168 485 ntBASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 AC067805.1-201ENST00000559344 470 ntBASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 AL353748.2-201ENST00000622148 471 ntBASIC1.28□□□□□ -2.2
VPS13DQ5THJ4 MIR337-201ENST00000362281 93 ntBASIC1.28□□□□□ -2.21
VPS13DQ5THJ4 RNA5SP295-201ENST00000362655 121 ntBASIC1.28□□□□□ -2.21
VPS13DQ5THJ4 USP9YP6-201ENST00000413550 854 ntBASIC1.28□□□□□ -2.21
VPS13DQ5THJ4 ATP5F1P1-201ENST00000433775 569 ntBASIC1.28□□□□□ -2.21
VPS13DQ5THJ4 HSPE1P28-201ENST00000443139 211 ntBASIC1.28□□□□□ -2.21
VPS13DQ5THJ4 USP9YP34-201ENST00000453983 808 ntBASIC1.28□□□□□ -2.21
VPS13DQ5THJ4 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.28□□□□□ -2.21
VPS13DQ5THJ4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC1.28□□□□□ -2.21
VPS13DQ5THJ4 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.28□□□□□ -2.21
VPS13DQ5THJ4 VN1R7P-201ENST00000619242 903 ntBASIC1.28□□□□□ -2.21
VPS13DQ5THJ4 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.28□□□□□ -2.21
VPS13DQ5THJ4 AC012321.1-201ENST00000561622 1588 ntBASIC1.28□□□□□ -2.21
VPS13DQ5THJ4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 HMGB1P10-201ENST00000395823 563 ntBASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 AC131902.3-201ENST00000611767 581 ntBASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 AL592437.2-201ENST00000421655 2434 ntBASIC1.27□□□□□ -2.21
VPS13DQ5THJ4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms