Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RNU6-55P-201ENST00000411092 107 ntBASIC6.49□□□□□ -1.37
RC3H1Q5TC82 RNU2-71P-201ENST00000411395 189 ntBASIC6.49□□□□□ -1.37
RC3H1Q5TC82 Z99755.1-201ENST00000414048 380 ntBASIC6.49□□□□□ -1.37
RC3H1Q5TC82 RAC1P3-201ENST00000416129 580 ntBASIC6.49□□□□□ -1.37
RC3H1Q5TC82 AL139095.3-201ENST00000419672 1203 ntBASIC6.49□□□□□ -1.37
RC3H1Q5TC82 IGHV5-78-201ENST00000450948 295 ntBASIC6.49□□□□□ -1.37
RC3H1Q5TC82 RPS23P7-201ENST00000466210 444 ntBASIC6.49□□□□□ -1.37
RC3H1Q5TC82 AC098583.1-201ENST00000480875 255 ntBASIC6.49□□□□□ -1.37
RC3H1Q5TC82 AC022133.1-201ENST00000490961 571 ntBASIC6.49□□□□□ -1.37
RC3H1Q5TC82 DEFB109F-201ENST00000491870 277 ntBASIC6.49□□□□□ -1.37
RC3H1Q5TC82 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 AC068446.3-201ENST00000555285 382 ntBASIC6.49□□□□□ -1.37
RC3H1Q5TC82 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
RC3H1Q5TC82 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
RC3H1Q5TC82 AL049555.1-201ENST00000562834 1933 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
RC3H1Q5TC82 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
RC3H1Q5TC82 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.48□□□□□ -1.37
RC3H1Q5TC82 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
RC3H1Q5TC82 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
RC3H1Q5TC82 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.48□□□□□ -1.37
RC3H1Q5TC82 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
RC3H1Q5TC82 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RC3H1Q5TC82 RNA5SP191-201ENST00000362585 102 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 RNU1-85P-201ENST00000364127 164 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 U3.10-201ENST00000364459 214 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 RNU6-128P-201ENST00000383976 107 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 RNU6-190P-201ENST00000384154 102 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 SNORA41-201ENST00000384675 132 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 RNU2-14P-201ENST00000411053 191 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 AL451074.5-201ENST00000415894 435 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.48□□□□□ -1.37
RC3H1Q5TC82 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.48□□□□□ -1.37
RC3H1Q5TC82 AL590632.1-201ENST00000424289 371 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 RPL18P10-201ENST00000425606 538 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 SNORD5.1-201ENST00000458800 75 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 AC010326.1-201ENST00000462726 602 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 RN7SL189P-201ENST00000468631 289 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 AC108860.1-201ENST00000484521 383 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 SNORA25.11-201ENST00000515935 105 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 IL7-206ENST00000520269 456 ntTSL 3 BASIC6.48□□□□□ -1.37
RC3H1Q5TC82 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.48□□□□□ -1.37
RC3H1Q5TC82 AC040926.1-201ENST00000530195 238 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.48□□□□□ -1.37
RC3H1Q5TC82 AC084783.1-201ENST00000565846 910 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 AC005899.2-201ENST00000584353 90 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC6.48□□□□□ -1.37
RC3H1Q5TC82 AC011494.1-201ENST00000596454 237 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 MIR6758-201ENST00000620653 63 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 AP000843.1-201ENST00000624880 701 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 AC091925.2-201ENST00000625059 256 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 AC092070.2-203ENST00000598377 3644 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 AC022893.2-201ENST00000564832 3296 ntBASIC6.48□□□□□ -1.37
RC3H1Q5TC82 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
RC3H1Q5TC82 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RC3H1Q5TC82 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RC3H1Q5TC82 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RC3H1Q5TC82 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RC3H1Q5TC82 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RC3H1Q5TC82 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RC3H1Q5TC82 AC010266.2-201ENST00000564741 3255 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 PABPC1P7-201ENST00000413177 1513 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 Y_RNA.2-201ENST00000362330 96 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 RNU6-545P-201ENST00000362681 104 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 RNU6-1287P-201ENST00000362914 107 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 RNU6-511P-201ENST00000363496 107 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 SNORA70.2-201ENST00000364506 135 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 Y_RNA.297-201ENST00000364950 91 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 RNU6-806P-201ENST00000365147 105 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 RNU6-1060P-201ENST00000384664 107 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 RNU4-46P-201ENST00000410818 138 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 AC011933.1-201ENST00000413334 321 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC6.47□□□□□ -1.37
RC3H1Q5TC82 RPL7P46-201ENST00000425129 740 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 MTCO3P29-201ENST00000432119 779 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 BX323845.1-201ENST00000432417 179 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 AC243772.1-201ENST00000451620 410 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 AC009963.2-201ENST00000453431 138 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 AC108059.3-201ENST00000456388 214 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 snoU13.1-201ENST00000459157 104 ntBASIC6.47□□□□□ -1.37
RC3H1Q5TC82 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms