Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC38Q502W7 GNRHR2P1-201ENST00000555315 631 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 PARP1P2-201ENST00000556806 195 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC38Q502W7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC38Q502W7 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.16□□□□□ -1.74
CCDC38Q502W7 AC012414.6-201ENST00000568241 401 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 AC012417.1-201ENST00000582307 1039 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 NBR2-204ENST00000587322 63 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC38Q502W7 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC38Q502W7 ARF4P1-201ENST00000605447 541 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 AC080013.6-201ENST00000606185 215 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 AC135507.1-201ENST00000607214 561 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 AC093783.1-201ENST00000612976 329 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 AL450472.3-201ENST00000615578 367 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 AC009090.3-201ENST00000616553 565 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 AC012150.2-201ENST00000621300 544 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC38Q502W7 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC38Q502W7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CCDC38Q502W7 AL133383.2-201ENST00000622958 2336 ntBASIC4.16□□□□□ -1.74
CCDC38Q502W7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC38Q502W7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC38Q502W7 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
CCDC38Q502W7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.15□□□□□ -1.74
CCDC38Q502W7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCDC38Q502W7 TNPO1P3-201ENST00000436471 2662 ntBASIC4.15□□□□□ -1.74
CCDC38Q502W7 AC126755.2-208ENST00000327792 462 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 AC138969.1-213ENST00000331436 462 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 MIR383-201ENST00000362257 73 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 RNU1-18P-201ENST00000363062 164 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC38Q502W7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC38Q502W7 RNY3P10-201ENST00000384764 102 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 RNU6-754P-201ENST00000391166 107 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 RPL7P25-201ENST00000404151 721 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 AC078974.1-201ENST00000411597 223 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC38Q502W7 RPL7AP73-201ENST00000413490 353 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 RPL30P2-201ENST00000414021 291 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 AC009237.5-201ENST00000414271 501 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC38Q502W7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC38Q502W7 RPL35AP22-201ENST00000436855 335 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 RPL22P17-201ENST00000438729 315 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC38Q502W7 USP9YP12-201ENST00000450481 570 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 RPL9P32-201ENST00000464118 620 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 FTH1P2-201ENST00000466086 412 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC38Q502W7 RN7SL271P-201ENST00000487601 295 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 RPL29P14-201ENST00000495837 428 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC38Q502W7 VN1R104P-201ENST00000505115 1009 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 BTF3L4P4-201ENST00000506381 449 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 SNORA31.8-201ENST00000516327 108 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 RNU6-798P-201ENST00000516912 103 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC38Q502W7 AP000907.2-201ENST00000530827 353 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.15□□□□□ -1.75
CCDC38Q502W7 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC38Q502W7 AP005136.1-201ENST00000579765 429 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.15□□□□□ -1.75
CCDC38Q502W7 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC38Q502W7 AC068790.3-201ENST00000602988 553 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 AP001330.4-201ENST00000604350 154 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 AC083809.1-201ENST00000615051 472 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 AC243312.2-201ENST00000623340 601 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 AC048347.1-201ENST00000624621 427 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 AP003399.1-201ENST00000637534 361 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 AC009812.4-201ENST00000569134 1805 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC38Q502W7 AC024560.2-201ENST00000507981 1497 ntBASIC4.15□□□□□ -1.75
CCDC38Q502W7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC38Q502W7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC38Q502W7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC38Q502W7 GABPAP-201ENST00000419271 1356 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CCDC38Q502W7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CCDC38Q502W7 AC006504.1-201ENST00000562493 3666 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 AC116667.1-201ENST00000604855 2072 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC38Q502W7 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
CCDC38Q502W7 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC38Q502W7 HMGN1P24-201ENST00000412282 298 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC38Q502W7 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC38Q502W7 CRYBB2P1-203ENST00000415709 538 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.14□□□□□ -1.75
CCDC38Q502W7 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC38Q502W7 AL356583.2-201ENST00000426536 280 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC38Q502W7 BTF3P10-201ENST00000433415 495 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 AC090774.1-201ENST00000435925 246 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 TPT1P14-201ENST00000448018 505 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC38Q502W7 TMED11P-201ENST00000479478 690 ntBASIC4.14□□□□□ -1.75
CCDC38Q502W7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms