Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AL034418.1-201ENST00000448675 860 ntBASIC2.12□□□□□ -2.07
CCDC58Q4VC31 RPL23AP15-201ENST00000450202 459 ntBASIC2.12□□□□□ -2.07
CCDC58Q4VC31 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC58Q4VC31 RPL36AP51-201ENST00000487216 318 ntBASIC2.12□□□□□ -2.07
CCDC58Q4VC31 AC108157.1-201ENST00000510511 539 ntBASIC2.12□□□□□ -2.07
CCDC58Q4VC31 SETP12-201ENST00000514068 805 ntBASIC2.12□□□□□ -2.07
CCDC58Q4VC31 RN7SKP24-201ENST00000515888 284 ntBASIC2.12□□□□□ -2.07
CCDC58Q4VC31 IGKV2D-36-201ENST00000518643 226 ntBASIC2.12□□□□□ -2.07
CCDC58Q4VC31 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC58Q4VC31 AC113192.3-201ENST00000529152 742 ntBASIC2.12□□□□□ -2.07
CCDC58Q4VC31 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC58Q4VC31 AC010546.1-201ENST00000569391 485 ntBASIC2.12□□□□□ -2.07
CCDC58Q4VC31 AC061975.8-201ENST00000587058 721 ntBASIC2.12□□□□□ -2.07
CCDC58Q4VC31 ELOCP29-201ENST00000588193 334 ntBASIC2.12□□□□□ -2.07
CCDC58Q4VC31 VN1R74P-201ENST00000613259 503 ntBASIC2.12□□□□□ -2.07
CCDC58Q4VC31 AC097372.4-201ENST00000625025 466 ntBASIC2.12□□□□□ -2.07
CCDC58Q4VC31 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC58Q4VC31 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.11□□□□□ -2.07
CCDC58Q4VC31 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC58Q4VC31 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC58Q4VC31 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC58Q4VC31 AL139039.1-201ENST00000401900 692 ntBASIC2.11□□□□□ -2.07
CCDC58Q4VC31 RNU4-78P-201ENST00000410940 126 ntBASIC2.11□□□□□ -2.07
CCDC58Q4VC31 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.11□□□□□ -2.07
CCDC58Q4VC31 ARL2BPP3-201ENST00000421226 480 ntBASIC2.11□□□□□ -2.07
CCDC58Q4VC31 AC091390.3-201ENST00000426478 338 ntBASIC2.11□□□□□ -2.07
CCDC58Q4VC31 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC58Q4VC31 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC58Q4VC31 GPM6BP3-201ENST00000442797 145 ntBASIC2.11□□□□□ -2.07
CCDC58Q4VC31 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.11□□□□□ -2.07
CCDC58Q4VC31 AP000936.2-201ENST00000447151 681 ntBASIC2.11□□□□□ -2.07
CCDC58Q4VC31 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC58Q4VC31 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC58Q4VC31 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC58Q4VC31 AC010099.1-201ENST00000455434 375 ntBASIC2.11□□□□□ -2.07
CCDC58Q4VC31 AC097493.1-201ENST00000463958 372 ntBASIC2.11□□□□□ -2.07
CCDC58Q4VC31 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC58Q4VC31 AC034159.1-201ENST00000513885 583 ntBASIC2.11□□□□□ -2.07
CCDC58Q4VC31 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.11□□□□□ -2.07
CCDC58Q4VC31 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC58Q4VC31 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC58Q4VC31 AP005205.1-201ENST00000563503 508 ntBASIC2.11□□□□□ -2.07
CCDC58Q4VC31 AGGF1P5-201ENST00000567900 919 ntBASIC2.11□□□□□ -2.07
CCDC58Q4VC31 AC090666.1-201ENST00000578241 445 ntBASIC2.11□□□□□ -2.07
CCDC58Q4VC31 AL669831.4-202ENST00000590817 238 ntBASIC2.11□□□□□ -2.07
CCDC58Q4VC31 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.11□□□□□ -2.07
CCDC58Q4VC31 AC092608.2-201ENST00000624427 218 ntBASIC2.11□□□□□ -2.07
CCDC58Q4VC31 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC58Q4VC31 MTND4P1-201ENST00000457501 1466 ntBASIC2.11□□□□□ -2.07
CCDC58Q4VC31 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC58Q4VC31 AC022336.2-201ENST00000568966 2538 ntBASIC2.11□□□□□ -2.07
CCDC58Q4VC31 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC58Q4VC31 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC58Q4VC31 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC58Q4VC31 RNU6-374P-201ENST00000364146 108 ntBASIC2.1□□□□□ -2.07
CCDC58Q4VC31 RNU6-167P-201ENST00000384292 106 ntBASIC2.1□□□□□ -2.07
CCDC58Q4VC31 MIR670-201ENST00000390142 98 ntBASIC2.1□□□□□ -2.07
CCDC58Q4VC31 AL359511.1-201ENST00000402970 211 ntBASIC2.1□□□□□ -2.07
CCDC58Q4VC31 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.1□□□□□ -2.07
CCDC58Q4VC31 RNA5SP338-201ENST00000410495 85 ntBASIC2.1□□□□□ -2.07
CCDC58Q4VC31 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC58Q4VC31 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC58Q4VC31 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC58Q4VC31 AC023512.1-201ENST00000444513 499 ntBASIC2.1□□□□□ -2.07
CCDC58Q4VC31 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC58Q4VC31 COX6CP12-201ENST00000446748 202 ntBASIC2.1□□□□□ -2.07
CCDC58Q4VC31 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC58Q4VC31 RPL7P49-201ENST00000471402 708 ntBASIC2.1□□□□□ -2.07
CCDC58Q4VC31 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC58Q4VC31 AC093663.2-201ENST00000484625 313 ntBASIC2.1□□□□□ -2.07
CCDC58Q4VC31 AC011825.1-201ENST00000484967 388 ntBASIC2.1□□□□□ -2.07
CCDC58Q4VC31 EIF4EP3-201ENST00000498782 656 ntBASIC2.1□□□□□ -2.07
CCDC58Q4VC31 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC58Q4VC31 TTC39CP1-201ENST00000512513 755 ntBASIC2.1□□□□□ -2.07
CCDC58Q4VC31 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC58Q4VC31 HMGB1P23-201ENST00000518743 568 ntBASIC2.1□□□□□ -2.07
CCDC58Q4VC31 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC58Q4VC31 COX6CP5-201ENST00000527162 228 ntBASIC2.1□□□□□ -2.07
CCDC58Q4VC31 AC068339.2-201ENST00000534395 618 ntBASIC2.1□□□□□ -2.07
CCDC58Q4VC31 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC58Q4VC31 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC58Q4VC31 AC012557.1-201ENST00000607115 611 ntBASIC2.1□□□□□ -2.07
CCDC58Q4VC31 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC58Q4VC31 AC005332.10-201ENST00000612725 619 ntBASIC2.1□□□□□ -2.07
CCDC58Q4VC31 AL161629.2-201ENST00000615347 275 ntBASIC2.1□□□□□ -2.07
CCDC58Q4VC31 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC58Q4VC31 MIR1291-201ENST00000627649 87 ntBASIC2.1□□□□□ -2.07
CCDC58Q4VC31 AC010680.1-201ENST00000590024 3590 ntBASIC2.1□□□□□ -2.07
CCDC58Q4VC31 AC131280.1-202ENST00000624067 4211 ntBASIC2.09□□□□□ -2.07
CCDC58Q4VC31 RNU1-85P-201ENST00000364127 164 ntBASIC2.09□□□□□ -2.07
CCDC58Q4VC31 Y_RNA.493-201ENST00000384422 102 ntBASIC2.09□□□□□ -2.07
CCDC58Q4VC31 RNA5SP354-201ENST00000391247 136 ntBASIC2.09□□□□□ -2.07
CCDC58Q4VC31 SNORD23.1-201ENST00000408212 104 ntBASIC2.09□□□□□ -2.07
CCDC58Q4VC31 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.09□□□□□ -2.07
CCDC58Q4VC31 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC58Q4VC31 ATP5F1P1-201ENST00000433775 569 ntBASIC2.09□□□□□ -2.07
CCDC58Q4VC31 UBE2FP3-201ENST00000436366 524 ntBASIC2.09□□□□□ -2.07
CCDC58Q4VC31 PSPHP1-201ENST00000450062 261 ntBASIC2.09□□□□□ -2.07
CCDC58Q4VC31 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC58Q4VC31 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms