Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 MTND6P33-201ENST00000571794 183 ntBASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 AL590282.1-201ENST00000610379 1136 ntBASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 TUG1_2.1-201ENST00000614234 87 ntBASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 OR5H6-203ENST00000642105 978 ntBASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCDC144BQ3MJ40 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 RNU6-181P-201ENST00000363225 107 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 RNU5E-8P-201ENST00000363502 116 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 RNA5SP189-201ENST00000364920 115 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 RPS3AP24-201ENST00000407896 734 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 RN7SKP159-201ENST00000410657 292 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 RNU4-55P-201ENST00000410731 137 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 EIF1P1-201ENST00000421436 341 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 DUTP6-201ENST00000425573 462 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 RPS12P10-201ENST00000427031 377 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 AC122718.1-201ENST00000439448 744 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 AC005094.1-201ENST00000440420 368 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 AC016696.1-201ENST00000446949 318 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 RN7SL98P-201ENST00000462271 300 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 FAM133DP-201ENST00000464802 691 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 AC091167.1-201ENST00000492017 396 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 AC005921.1-201ENST00000510589 286 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 SAP18P1-201ENST00000512058 390 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 RNU6-314P-201ENST00000516574 104 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 RNU6-445P-201ENST00000516949 107 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 MRPL49P2-201ENST00000521066 465 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 AC022616.3-201ENST00000523940 148 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 AC128657.1-201ENST00000549459 145 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 MTATP6P3-201ENST00000581686 676 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 IPO5P1-202ENST00000600039 287 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 VN1R85P-201ENST00000601587 426 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 AC068790.5-201ENST00000602741 355 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 AC007684.1-201ENST00000609671 477 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 AC024941.1-201ENST00000612250 334 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 ZYXP1-201ENST00000617638 118 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 AL360181.4-201ENST00000621752 134 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 CR381653.2-201ENST00000624041 768 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 AC138649.5-201ENST00000637456 137 ntBASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.13□□□□□ -1.59
CCDC144BQ3MJ40 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 AC116096.1-201ENST00000566804 2314 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 AC105074.1-201ENST00000623380 3095 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 RNA5SP52-201ENST00000362448 134 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 RNU1-108P-201ENST00000362556 161 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 RNU6-1097P-201ENST00000363586 107 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 SNORA51.2-201ENST00000364595 132 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 SNORA37-201ENST00000384504 129 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 AC097374.1-203ENST00000400783 485 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 RNA5SP107-201ENST00000411358 122 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 AL160275.2-201ENST00000412010 394 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 PHBP16-201ENST00000446318 950 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 AC079781.2-201ENST00000446424 169 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 AC140076.1-201ENST00000449897 361 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 FABP3P2-201ENST00000453169 399 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 ISCUP1-201ENST00000454451 448 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 AC022364.2-201ENST00000457963 554 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 AC105137.1-201ENST00000484355 562 ntBASIC5.12□□□□□ -1.59
CCDC144BQ3MJ40 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms