Protein–RNA interactions for Protein: Q15915

ZIC1, Zinc finger protein ZIC 1, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC1Q15915 AC090453.1-201ENST00000495560 436 ntBASIC3.09□□□□□ -1.91
ZIC1Q15915 AC114981.1-201ENST00000503897 678 ntBASIC3.09□□□□□ -1.91
ZIC1Q15915 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ZIC1Q15915 XKRY-201ENST00000510392 1100 ntBASIC3.09□□□□□ -1.91
ZIC1Q15915 SNORA74D-201ENST00000516404 141 ntBASIC3.09□□□□□ -1.91
ZIC1Q15915 SCARNA20.6-201ENST00000517251 106 ntBASIC3.09□□□□□ -1.91
ZIC1Q15915 AC104027.1-201ENST00000521887 300 ntBASIC3.09□□□□□ -1.91
ZIC1Q15915 HSPA8P13-201ENST00000523715 472 ntBASIC3.09□□□□□ -1.91
ZIC1Q15915 AC010198.2-201ENST00000550612 259 ntBASIC3.09□□□□□ -1.91
ZIC1Q15915 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.09□□□□□ -1.91
ZIC1Q15915 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.09□□□□□ -1.91
ZIC1Q15915 AL512347.1-201ENST00000566420 503 ntBASIC3.09□□□□□ -1.91
ZIC1Q15915 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.09□□□□□ -1.91
ZIC1Q15915 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.09□□□□□ -1.91
ZIC1Q15915 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.09□□□□□ -1.91
ZIC1Q15915 XIAPP1-201ENST00000603162 600 ntBASIC3.09□□□□□ -1.91
ZIC1Q15915 BNIP3P11-201ENST00000603878 563 ntBASIC3.09□□□□□ -1.91
ZIC1Q15915 AC128687.1-201ENST00000605304 619 ntBASIC3.09□□□□□ -1.91
ZIC1Q15915 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.09□□□□□ -1.91
ZIC1Q15915 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.09□□□□□ -1.91
ZIC1Q15915 AC097478.2-201ENST00000610572 514 ntBASIC3.09□□□□□ -1.91
ZIC1Q15915 AC025588.4-201ENST00000615802 908 ntBASIC3.09□□□□□ -1.91
ZIC1Q15915 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.09□□□□□ -1.91
ZIC1Q15915 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.09□□□□□ -1.91
ZIC1Q15915 AC006927.4-201ENST00000639187 543 ntBASIC3.09□□□□□ -1.91
ZIC1Q15915 MTND5P24-201ENST00000438892 1767 ntBASIC3.09□□□□□ -1.91
ZIC1Q15915 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
ZIC1Q15915 ZNF876P-202ENST00000398732 1485 ntBASIC3.09□□□□□ -1.92
ZIC1Q15915 AL390862.1-201ENST00000635467 1469 ntBASIC3.09□□□□□ -1.92
ZIC1Q15915 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
ZIC1Q15915 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.09□□□□□ -1.92
ZIC1Q15915 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.09□□□□□ -1.92
ZIC1Q15915 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZIC1Q15915 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
ZIC1Q15915 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZIC1Q15915 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
ZIC1Q15915 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.08□□□□□ -1.92
ZIC1Q15915 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.08□□□□□ -1.92
ZIC1Q15915 RNU6-83P-201ENST00000384568 112 ntBASIC3.08□□□□□ -1.92
ZIC1Q15915 MIR607-201ENST00000385241 96 ntBASIC3.08□□□□□ -1.92
ZIC1Q15915 RNU4-47P-201ENST00000410876 114 ntBASIC3.08□□□□□ -1.92
ZIC1Q15915 RPS7P13-201ENST00000413955 498 ntBASIC3.08□□□□□ -1.92
ZIC1Q15915 AC092447.6-201ENST00000414578 210 ntBASIC3.08□□□□□ -1.92
ZIC1Q15915 HMGB1P49-201ENST00000418882 569 ntBASIC3.08□□□□□ -1.92
ZIC1Q15915 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.08□□□□□ -1.92
ZIC1Q15915 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.08□□□□□ -1.92
ZIC1Q15915 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.08□□□□□ -1.92
ZIC1Q15915 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.08□□□□□ -1.92
ZIC1Q15915 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.08□□□□□ -1.92
ZIC1Q15915 AC005297.2-201ENST00000450430 606 ntBASIC3.08□□□□□ -1.92
ZIC1Q15915 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.08□□□□□ -1.92
ZIC1Q15915 ELOCP23-201ENST00000452014 332 ntBASIC3.08□□□□□ -1.92
ZIC1Q15915 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.08□□□□□ -1.92
ZIC1Q15915 snoU109.4-201ENST00000458953 143 ntBASIC3.08□□□□□ -1.92
ZIC1Q15915 RN7SL863P-201ENST00000462370 296 ntBASIC3.08□□□□□ -1.92
ZIC1Q15915 RPL21P104-201ENST00000464143 478 ntBASIC3.08□□□□□ -1.92
ZIC1Q15915 AC109925.1-201ENST00000478069 331 ntBASIC3.08□□□□□ -1.92
ZIC1Q15915 RPL31P13-201ENST00000484151 370 ntBASIC3.08□□□□□ -1.92
ZIC1Q15915 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.08□□□□□ -1.92
ZIC1Q15915 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.08□□□□□ -1.92
ZIC1Q15915 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.08□□□□□ -1.92
ZIC1Q15915 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.08□□□□□ -1.92
ZIC1Q15915 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.08□□□□□ -1.92
ZIC1Q15915 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.08□□□□□ -1.92
ZIC1Q15915 AC010587.2-201ENST00000511727 448 ntBASIC3.08□□□□□ -1.92
ZIC1Q15915 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.08□□□□□ -1.92
ZIC1Q15915 AC006499.2-201ENST00000513470 337 ntBASIC3.08□□□□□ -1.92
ZIC1Q15915 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.08□□□□□ -1.92
ZIC1Q15915 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.08□□□□□ -1.92
ZIC1Q15915 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
ZIC1Q15915 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.08□□□□□ -1.92
ZIC1Q15915 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.08□□□□□ -1.92
ZIC1Q15915 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.08□□□□□ -1.92
ZIC1Q15915 AC009712.1-201ENST00000564938 316 ntBASIC3.08□□□□□ -1.92
ZIC1Q15915 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.08□□□□□ -1.92
ZIC1Q15915 OR5BR1P-201ENST00000524992 1330 ntBASIC3.08□□□□□ -1.92
ZIC1Q15915 AC244517.1-201ENST00000606030 2086 ntBASIC3.08□□□□□ -1.92
ZIC1Q15915 AC010733.2-201ENST00000589496 5702 ntBASIC3.08□□□□□ -1.92
ZIC1Q15915 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZIC1Q15915 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.08□□□□□ -1.92
ZIC1Q15915 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.08□□□□□ -1.92
ZIC1Q15915 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ZIC1Q15915 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.07□□□□□ -1.92
ZIC1Q15915 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ZIC1Q15915 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ZIC1Q15915 SNORA51.2-201ENST00000364595 132 ntBASIC3.07□□□□□ -1.92
ZIC1Q15915 SNORD51-201ENST00000384320 80 ntBASIC3.07□□□□□ -1.92
ZIC1Q15915 RPL23AP29-201ENST00000397284 453 ntBASIC3.07□□□□□ -1.92
ZIC1Q15915 HMGB1P17-201ENST00000403495 628 ntBASIC3.07□□□□□ -1.92
ZIC1Q15915 AP000567.1-201ENST00000406413 156 ntBASIC3.07□□□□□ -1.92
ZIC1Q15915 MIR1284-201ENST00000408337 120 ntBASIC3.07□□□□□ -1.92
ZIC1Q15915 RNU6-712P-201ENST00000410558 100 ntBASIC3.07□□□□□ -1.92
ZIC1Q15915 RNA5SP107-201ENST00000411358 122 ntBASIC3.07□□□□□ -1.92
ZIC1Q15915 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.07□□□□□ -1.92
ZIC1Q15915 RAD23BP2-201ENST00000416003 1207 ntBASIC3.07□□□□□ -1.92
ZIC1Q15915 AL353678.1-201ENST00000422735 741 ntBASIC3.07□□□□□ -1.92
ZIC1Q15915 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.07□□□□□ -1.92
ZIC1Q15915 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.07□□□□□ -1.92
ZIC1Q15915 MTND4P6-201ENST00000438297 472 ntBASIC3.07□□□□□ -1.92
ZIC1Q15915 HMGB1P12-201ENST00000438594 598 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms