Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AC006499.2-201ENST00000513470 337 ntBASIC3.2□□□□□ -1.9
CDKL1Q00532 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.2□□□□□ -1.9
CDKL1Q00532 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.2□□□□□ -1.9
CDKL1Q00532 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.2□□□□□ -1.9
CDKL1Q00532 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.2□□□□□ -1.9
CDKL1Q00532 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CDKL1Q00532 DEFB131D-201ENST00000526803 184 ntBASIC3.2□□□□□ -1.9
CDKL1Q00532 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDKL1Q00532 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.2□□□□□ -1.9
CDKL1Q00532 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDKL1Q00532 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.2□□□□□ -1.9
CDKL1Q00532 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.2□□□□□ -1.9
CDKL1Q00532 CYCSP2-201ENST00000558168 301 ntBASIC3.2□□□□□ -1.9
CDKL1Q00532 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.2□□□□□ -1.9
CDKL1Q00532 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDKL1Q00532 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.2□□□□□ -1.9
CDKL1Q00532 AC061975.8-201ENST00000587058 721 ntBASIC3.2□□□□□ -1.9
CDKL1Q00532 AL390208.1-201ENST00000605885 644 ntBASIC3.2□□□□□ -1.9
CDKL1Q00532 AC107952.2-201ENST00000606048 486 ntBASIC3.2□□□□□ -1.9
CDKL1Q00532 AC107294.3-201ENST00000609211 526 ntBASIC3.2□□□□□ -1.9
CDKL1Q00532 AL139418.1-201ENST00000613613 177 ntBASIC3.2□□□□□ -1.9
CDKL1Q00532 AC091046.2-201ENST00000620775 665 ntBASIC3.2□□□□□ -1.9
CDKL1Q00532 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDKL1Q00532 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDKL1Q00532 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CDKL1Q00532 U3.6-201ENST00000363622 211 ntBASIC3.19□□□□□ -1.9
CDKL1Q00532 RNU6-621P-201ENST00000364752 109 ntBASIC3.19□□□□□ -1.9
CDKL1Q00532 SNORA62.3-201ENST00000365110 153 ntBASIC3.19□□□□□ -1.9
CDKL1Q00532 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDKL1Q00532 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.19□□□□□ -1.9
CDKL1Q00532 Y_RNA.548-201ENST00000384656 105 ntBASIC3.19□□□□□ -1.9
CDKL1Q00532 RNA5SP129-201ENST00000410276 118 ntBASIC3.19□□□□□ -1.9
CDKL1Q00532 HMGN1P24-201ENST00000412282 298 ntBASIC3.19□□□□□ -1.9
CDKL1Q00532 NDUFB4P5-201ENST00000415445 361 ntBASIC3.19□□□□□ -1.9
CDKL1Q00532 HSFY4P-201ENST00000415994 1181 ntBASIC3.19□□□□□ -1.9
CDKL1Q00532 SSXP9-201ENST00000417503 292 ntBASIC3.19□□□□□ -1.9
CDKL1Q00532 MUPP-201ENST00000438111 566 ntBASIC3.19□□□□□ -1.9
CDKL1Q00532 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDKL1Q00532 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.19□□□□□ -1.9
CDKL1Q00532 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.19□□□□□ -1.9
CDKL1Q00532 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.19□□□□□ -1.9
CDKL1Q00532 AL353691.1-201ENST00000451332 387 ntBASIC3.19□□□□□ -1.9
CDKL1Q00532 Z82190.1-201ENST00000454534 490 ntBASIC3.19□□□□□ -1.9
CDKL1Q00532 RN7SL75P-201ENST00000461926 281 ntBASIC3.19□□□□□ -1.9
CDKL1Q00532 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.19□□□□□ -1.9
CDKL1Q00532 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.19□□□□□ -1.9
CDKL1Q00532 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDKL1Q00532 AL024509.2-201ENST00000493462 493 ntBASIC3.19□□□□□ -1.9
CDKL1Q00532 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.19□□□□□ -1.9
CDKL1Q00532 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.19□□□□□ -1.9
CDKL1Q00532 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.19□□□□□ -1.9
CDKL1Q00532 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.19□□□□□ -1.9
CDKL1Q00532 RNU6-1095P-201ENST00000516148 108 ntBASIC3.19□□□□□ -1.9
CDKL1Q00532 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.19□□□□□ -1.9
CDKL1Q00532 MTCO2P15-201ENST00000532655 656 ntBASIC3.19□□□□□ -1.9
CDKL1Q00532 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.19□□□□□ -1.9
CDKL1Q00532 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.19□□□□□ -1.9
CDKL1Q00532 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.19□□□□□ -1.9
CDKL1Q00532 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.19□□□□□ -1.9
CDKL1Q00532 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.19□□□□□ -1.9
CDKL1Q00532 AC010738.1-201ENST00000604970 987 ntBASIC3.19□□□□□ -1.9
CDKL1Q00532 AC245297.2-201ENST00000610119 565 ntBASIC3.19□□□□□ -1.9
CDKL1Q00532 AC097478.2-201ENST00000610572 514 ntBASIC3.19□□□□□ -1.9
CDKL1Q00532 XIST_intron.1-201ENST00000619444 68 ntBASIC3.19□□□□□ -1.9
CDKL1Q00532 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.19□□□□□ -1.9
CDKL1Q00532 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.19□□□□□ -1.9
CDKL1Q00532 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDKL1Q00532 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CDKL1Q00532 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDKL1Q00532 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
CDKL1Q00532 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDKL1Q00532 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDKL1Q00532 RNA5SP119-201ENST00000362715 117 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 RNU6-289P-201ENST00000364093 107 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 MIR449B-201ENST00000384995 97 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.18□□□□□ -1.9
CDKL1Q00532 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.18□□□□□ -1.9
CDKL1Q00532 AC007899.1-201ENST00000412776 775 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 TPMTP2-201ENST00000414372 726 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 AC007390.1-201ENST00000415722 356 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.18□□□□□ -1.9
CDKL1Q00532 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDKL1Q00532 MTCO2P17-201ENST00000424336 677 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.18□□□□□ -1.9
CDKL1Q00532 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.18□□□□□ -1.9
CDKL1Q00532 MTND4P6-201ENST00000438297 472 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 CDC27P1-201ENST00000445384 715 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.18□□□□□ -1.9
CDKL1Q00532 RPL7P52-201ENST00000449200 742 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.18□□□□□ -1.9
CDKL1Q00532 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.18□□□□□ -1.9
CDKL1Q00532 SUMO2P2-201ENST00000456482 255 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.18□□□□□ -1.9
CDKL1Q00532 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.18□□□□□ -1.9
CDKL1Q00532 snoU109.4-201ENST00000458953 143 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.18□□□□□ -1.9
CDKL1Q00532 SNRPGP3-201ENST00000469405 227 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 TMED11P-201ENST00000479478 690 ntBASIC3.18□□□□□ -1.9
CDKL1Q00532 RN7SL293P-201ENST00000481765 281 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms