Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 SNRPGP16-201ENST00000533275 226 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HOXC5Q00444 AC125611.2-201ENST00000551907 647 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 AL391156.1-201ENST00000554965 554 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 MIR4319-201ENST00000577285 85 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 AC021851.1-201ENST00000608537 1082 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 VIS1.1-201ENST00000610517 203 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 AL360181.4-201ENST00000621752 134 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 CR381572.1-201ENST00000625098 102 ntBASIC2.29□□□□□ -2.04
HOXC5Q00444 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.29□□□□□ -2.04
HOXC5Q00444 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
HOXC5Q00444 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HOXC5Q00444 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
HOXC5Q00444 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
HOXC5Q00444 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HOXC5Q00444 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HOXC5Q00444 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HOXC5Q00444 AC111188.2-201ENST00000529697 1387 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 NACA3P-201ENST00000359690 648 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 SNORA80A-201ENST00000363922 136 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 RNU1-51P-201ENST00000365345 176 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 SNORA80E-201ENST00000384744 137 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 RPS3AP26-201ENST00000398259 784 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 U3.37-201ENST00000408528 213 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 RNU6-712P-201ENST00000410558 100 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 AC098826.1-201ENST00000433943 471 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.28□□□□□ -2.04
HOXC5Q00444 AL645638.1-201ENST00000440519 361 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.28□□□□□ -2.04
HOXC5Q00444 AC104073.1-201ENST00000451988 151 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.28□□□□□ -2.04
HOXC5Q00444 MTND2P6-201ENST00000455337 1030 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.28□□□□□ -2.04
HOXC5Q00444 AC096751.1-202ENST00000502691 1067 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 AC097462.2-201ENST00000504623 481 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 SEM1P1-201ENST00000506694 209 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.28□□□□□ -2.04
HOXC5Q00444 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.28□□□□□ -2.04
HOXC5Q00444 SNORA31.1-201ENST00000515993 133 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 SNORA31.5-201ENST00000516190 133 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 RNA5SP320-201ENST00000516263 124 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.28□□□□□ -2.04
HOXC5Q00444 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.28□□□□□ -2.04
HOXC5Q00444 OSBPL9P3-201ENST00000534523 595 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 AC093014.1-201ENST00000548926 724 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 PRELID2P1-201ENST00000552837 301 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.28□□□□□ -2.04
HOXC5Q00444 LARP7P3-201ENST00000579888 337 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.28□□□□□ -2.04
HOXC5Q00444 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.28□□□□□ -2.04
HOXC5Q00444 DPRXP5-201ENST00000604662 539 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 AC106791.2-201ENST00000604680 391 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 MIR7106-201ENST00000612419 65 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HOXC5Q00444 MTND2P41-201ENST00000637599 773 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 CRYM-AS1-204ENST00000637983 556 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
HOXC5Q00444 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.28□□□□□ -2.04
HOXC5Q00444 SEC63P2-201ENST00000503863 1939 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 AC011460.1-201ENST00000636268 1834 ntBASIC2.28□□□□□ -2.04
HOXC5Q00444 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HOXC5Q00444 AC069528.2-201ENST00000624849 1991 ntBASIC2.27□□□□□ -2.05
HOXC5Q00444 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HOXC5Q00444 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
HOXC5Q00444 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.27□□□□□ -2.05
HOXC5Q00444 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HOXC5Q00444 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HOXC5Q00444 RNU1-138P-201ENST00000384093 164 ntBASIC2.27□□□□□ -2.05
HOXC5Q00444 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.27□□□□□ -2.05
HOXC5Q00444 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.27□□□□□ -2.05
HOXC5Q00444 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.27□□□□□ -2.05
HOXC5Q00444 AL031183.1-201ENST00000457667 207 ntBASIC2.27□□□□□ -2.05
HOXC5Q00444 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.27□□□□□ -2.05
HOXC5Q00444 VN1R104P-201ENST00000505115 1009 ntBASIC2.27□□□□□ -2.05
HOXC5Q00444 AC006445.2-201ENST00000510061 472 ntBASIC2.27□□□□□ -2.05
HOXC5Q00444 AC107222.1-201ENST00000510899 637 ntBASIC2.27□□□□□ -2.05
HOXC5Q00444 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.27□□□□□ -2.05
HOXC5Q00444 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.27□□□□□ -2.05
HOXC5Q00444 RN7SKP24-201ENST00000515888 284 ntBASIC2.27□□□□□ -2.05
HOXC5Q00444 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.27□□□□□ -2.05
HOXC5Q00444 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.27□□□□□ -2.05
HOXC5Q00444 AC004217.3-201ENST00000551552 878 ntBASIC2.27□□□□□ -2.05
HOXC5Q00444 AC061975.8-201ENST00000587058 721 ntBASIC2.27□□□□□ -2.05
HOXC5Q00444 AC010620.2-201ENST00000600135 313 ntBASIC2.27□□□□□ -2.05
HOXC5Q00444 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.27□□□□□ -2.05
HOXC5Q00444 OR2AS2P-201ENST00000606902 342 ntBASIC2.27□□□□□ -2.05
HOXC5Q00444 AC016542.1-201ENST00000608259 493 ntBASIC2.27□□□□□ -2.05
HOXC5Q00444 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
HOXC5Q00444 AL355810.1-201ENST00000614629 552 ntBASIC2.27□□□□□ -2.05
HOXC5Q00444 AC006249.1-201ENST00000621223 471 ntBASIC2.27□□□□□ -2.05
HOXC5Q00444 CYP3A51P-201ENST00000633513 256 ntBASIC2.27□□□□□ -2.05
HOXC5Q00444 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
HOXC5Q00444 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HOXC5Q00444 SGO1P2-201ENST00000429458 1589 ntBASIC2.27□□□□□ -2.05
HOXC5Q00444 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
HOXC5Q00444 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HOXC5Q00444 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
HOXC5Q00444 RNU6-7-201ENST00000364784 107 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms