Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.26□□□□□ -1.89
CX3CL1P78423 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.26□□□□□ -1.89
CX3CL1P78423 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.26□□□□□ -1.89
CX3CL1P78423 SNRPGP16-201ENST00000533275 226 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.26□□□□□ -1.89
CX3CL1P78423 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.26□□□□□ -1.89
CX3CL1P78423 AC125611.2-201ENST00000551907 647 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 AC006362.1-201ENST00000567392 174 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.26□□□□□ -1.89
CX3CL1P78423 MTCYBP33-201ENST00000575007 1130 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.26□□□□□ -1.89
CX3CL1P78423 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.26□□□□□ -1.89
CX3CL1P78423 VN1R79P-201ENST00000593540 513 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 AC068790.3-201ENST00000602988 553 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 AC119501.1-201ENST00000603646 475 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 AL049634.3-201ENST00000604968 457 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.26□□□□□ -1.89
CX3CL1P78423 AL391813.2-201ENST00000609113 322 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 AC128687.2-201ENST00000609657 566 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 MIR6716-201ENST00000613413 80 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 MIR6758-201ENST00000620653 63 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 AL159972.1-201ENST00000625150 448 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 MIR6830-201ENST00000636015 70 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.26□□□□□ -1.89
CX3CL1P78423 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CX3CL1P78423 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CX3CL1P78423 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.26□□□□□ -1.89
CX3CL1P78423 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CX3CL1P78423 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CX3CL1P78423 TAB3P1-202ENST00000452645 1634 ntBASIC3.26□□□□□ -1.89
CX3CL1P78423 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.26□□□□□ -1.89
CX3CL1P78423 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CX3CL1P78423 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.25□□□□□ -1.89
CX3CL1P78423 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.25□□□□□ -1.89
CX3CL1P78423 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CX3CL1P78423 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.25□□□□□ -1.89
CX3CL1P78423 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
CX3CL1P78423 AL353746.1-201ENST00000566293 6881 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.25□□□□□ -1.89
CX3CL1P78423 MIR423-201ENST00000362201 94 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 SNORA60-201ENST00000362396 134 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 SNORD35B-201ENST00000363660 87 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 SNORA62-201ENST00000365493 153 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
CX3CL1P78423 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CX3CL1P78423 Y_RNA.625-201ENST00000411256 107 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 RNU6-516P-201ENST00000411381 104 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.25□□□□□ -1.89
CX3CL1P78423 MTND1P21-201ENST00000412991 285 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.25□□□□□ -1.89
CX3CL1P78423 C4BPAP2-201ENST00000428434 478 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.25□□□□□ -1.89
CX3CL1P78423 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.25□□□□□ -1.89
CX3CL1P78423 VDAC1P3-201ENST00000434069 851 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 AC090774.1-201ENST00000435925 246 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 AC004866.2-201ENST00000438285 481 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.25□□□□□ -1.89
CX3CL1P78423 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CX3CL1P78423 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.25□□□□□ -1.89
CX3CL1P78423 FABP3P2-201ENST00000453169 399 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 SSXP1-201ENST00000453640 473 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.25□□□□□ -1.89
CX3CL1P78423 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.25□□□□□ -1.89
CX3CL1P78423 AC020893.1-201ENST00000502452 580 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CX3CL1P78423 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.25□□□□□ -1.89
CX3CL1P78423 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.25□□□□□ -1.89
CX3CL1P78423 RNA5SP309-201ENST00000516670 106 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 RNU7-143P-201ENST00000516781 65 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 MRPL49P2-201ENST00000521066 465 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CX3CL1P78423 HIGD1AP5-201ENST00000529959 259 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 AP003122.4-201ENST00000530980 758 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 AC135279.1-201ENST00000543493 504 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.25□□□□□ -1.89
CX3CL1P78423 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.25□□□□□ -1.89
CX3CL1P78423 MIR3690-201ENST00000580266 75 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.25□□□□□ -1.89
CX3CL1P78423 AC005771.1-201ENST00000585581 349 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 AC009977.1-201ENST00000586015 570 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 BNIP3P8-201ENST00000597863 560 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 AL359999.1-201ENST00000604513 294 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 MIR378J-201ENST00000611988 109 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 AC010678.1-201ENST00000614118 713 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 AC006338.2-201ENST00000616864 791 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 AC243312.2-201ENST00000623340 601 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.25□□□□□ -1.89
CX3CL1P78423 AC010149.2-201ENST00000637608 315 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.25□□□□□ -1.89
CX3CL1P78423 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.25□□□□□ -1.89
CX3CL1P78423 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CX3CL1P78423 AC106871.1-201ENST00000568324 3102 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CX3CL1P78423 AL138713.1-201ENST00000624026 2130 ntBASIC3.25□□□□□ -1.89
CX3CL1P78423 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CX3CL1P78423 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
CX3CL1P78423 MARK2P15-201ENST00000432204 2186 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms