Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.55□□□□□ -2
RAB38P57729 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.55□□□□□ -2
RAB38P57729 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.55□□□□□ -2
RAB38P57729 SGO1P1-201ENST00000603525 1447 ntBASIC2.55□□□□□ -2
RAB38P57729 AC007619.2-201ENST00000605743 379 ntBASIC2.55□□□□□ -2
RAB38P57729 AC106028.5-201ENST00000610332 395 ntBASIC2.55□□□□□ -2
RAB38P57729 MIR6076-201ENST00000617521 113 ntBASIC2.55□□□□□ -2
RAB38P57729 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.55□□□□□ -2
RAB38P57729 BX649567.1-201ENST00000642071 1134 ntBASIC2.55□□□□□ -2
RAB38P57729 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
RAB38P57729 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.55□□□□□ -2
RAB38P57729 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RAB38P57729 AC011460.1-201ENST00000636268 1834 ntBASIC2.54□□□□□ -2
RAB38P57729 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
RAB38P57729 NUP58P1-201ENST00000502546 1738 ntBASIC2.54□□□□□ -2
RAB38P57729 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RAB38P57729 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.54□□□□□ -2
RAB38P57729 MIR16-1-201ENST00000385271 89 ntBASIC2.54□□□□□ -2
RAB38P57729 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.54□□□□□ -2
RAB38P57729 UBE2V1P15-201ENST00000407776 448 ntBASIC2.54□□□□□ -2
RAB38P57729 AC092447.6-201ENST00000414578 210 ntBASIC2.54□□□□□ -2
RAB38P57729 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.54□□□□□ -2
RAB38P57729 RPL23AP16-201ENST00000441715 421 ntBASIC2.54□□□□□ -2
RAB38P57729 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.54□□□□□ -2
RAB38P57729 RPL23AP11-201ENST00000475260 469 ntBASIC2.54□□□□□ -2
RAB38P57729 RPL30P14-201ENST00000482744 348 ntBASIC2.54□□□□□ -2
RAB38P57729 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.54□□□□□ -2
RAB38P57729 ARL4AP2-201ENST00000507378 601 ntBASIC2.54□□□□□ -2
RAB38P57729 CBX3P3-201ENST00000508108 532 ntBASIC2.54□□□□□ -2
RAB38P57729 AC010468.3-201ENST00000508225 458 ntBASIC2.54□□□□□ -2
RAB38P57729 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.54□□□□□ -2
RAB38P57729 AC106782.4-201ENST00000568264 210 ntBASIC2.54□□□□□ -2
RAB38P57729 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.54□□□□□ -2
RAB38P57729 AL137843.1-201ENST00000605078 385 ntBASIC2.54□□□□□ -2
RAB38P57729 AC055876.5-201ENST00000605667 259 ntBASIC2.54□□□□□ -2
RAB38P57729 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.54□□□□□ -2
RAB38P57729 AC107871.2-201ENST00000612894 502 ntBASIC2.54□□□□□ -2
RAB38P57729 AP003122.6-201ENST00000623831 495 ntBASIC2.54□□□□□ -2
RAB38P57729 AC090617.7-201ENST00000623952 126 ntBASIC2.54□□□□□ -2
RAB38P57729 CR381653.2-201ENST00000624041 768 ntBASIC2.54□□□□□ -2
RAB38P57729 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.54□□□□□ -2
RAB38P57729 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.53□□□□□ -2
RAB38P57729 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.53□□□□□ -2
RAB38P57729 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
RAB38P57729 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
RAB38P57729 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.53□□□□□ -2
RAB38P57729 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
RAB38P57729 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.53□□□□□ -2
RAB38P57729 SNORD65C-201ENST00000390962 71 ntBASIC2.53□□□□□ -2
RAB38P57729 U3.29-201ENST00000391296 212 ntBASIC2.53□□□□□ -2
RAB38P57729 RPS4XP3-201ENST00000398541 413 ntBASIC2.53□□□□□ -2
RAB38P57729 AL590004.2-201ENST00000404787 371 ntBASIC2.53□□□□□ -2
RAB38P57729 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.53□□□□□ -2
RAB38P57729 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.53□□□□□ -2
RAB38P57729 AC012497.1-201ENST00000429392 575 ntBASIC2.53□□□□□ -2
RAB38P57729 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.53□□□□□ -2
RAB38P57729 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.53□□□□□ -2
RAB38P57729 AC002542.1-201ENST00000440683 193 ntBASIC2.53□□□□□ -2
RAB38P57729 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.53□□□□□ -2
RAB38P57729 AL590664.1-201ENST00000448065 339 ntBASIC2.53□□□□□ -2
RAB38P57729 NDUFA5P7-201ENST00000452914 242 ntBASIC2.53□□□□□ -2
RAB38P57729 MTCO3P2-201ENST00000457365 171 ntBASIC2.53□□□□□ -2
RAB38P57729 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.53□□□□□ -2
RAB38P57729 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.53□□□□□ -2
RAB38P57729 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.53□□□□□ -2
RAB38P57729 AC093767.1-201ENST00000504523 156 ntBASIC2.53□□□□□ -2
RAB38P57729 VN1R104P-201ENST00000505115 1009 ntBASIC2.53□□□□□ -2
RAB38P57729 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.53□□□□□ -2
RAB38P57729 AC034159.1-201ENST00000513885 583 ntBASIC2.53□□□□□ -2
RAB38P57729 SETP12-201ENST00000514068 805 ntBASIC2.53□□□□□ -2
RAB38P57729 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.53□□□□□ -2
RAB38P57729 RNA5SP356-201ENST00000515972 94 ntBASIC2.53□□□□□ -2
RAB38P57729 HMGB1P1-201ENST00000522557 636 ntBASIC2.53□□□□□ -2
RAB38P57729 AP000916.1-201ENST00000533869 835 ntBASIC2.53□□□□□ -2
RAB38P57729 EEF1B2P4-201ENST00000551398 348 ntBASIC2.53□□□□□ -2
RAB38P57729 DNAJC8P1-201ENST00000554535 372 ntBASIC2.53□□□□□ -2
RAB38P57729 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.53□□□□□ -2
RAB38P57729 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.53□□□□□ -2
RAB38P57729 AP005205.1-201ENST00000563503 508 ntBASIC2.53□□□□□ -2
RAB38P57729 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.53□□□□□ -2
RAB38P57729 VN1R90P-201ENST00000595717 726 ntBASIC2.53□□□□□ -2
RAB38P57729 VN1R92P-201ENST00000598511 928 ntBASIC2.53□□□□□ -2
RAB38P57729 GAS5-AS1-201ENST00000602767 694 ntBASIC2.53□□□□□ -2
RAB38P57729 AC069234.5-201ENST00000611056 416 ntBASIC2.53□□□□□ -2
RAB38P57729 VN1R9P-201ENST00000614184 867 ntBASIC2.53□□□□□ -2
RAB38P57729 AL353748.2-201ENST00000622148 471 ntBASIC2.53□□□□□ -2
RAB38P57729 AP000676.4-201ENST00000624659 623 ntBASIC2.53□□□□□ -2
RAB38P57729 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.53□□□□□ -2
RAB38P57729 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.53□□□□□ -2
RAB38P57729 ZNF663P-202ENST00000641770 1131 ntBASIC2.53□□□□□ -2
RAB38P57729 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2.01
RAB38P57729 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
RAB38P57729 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.52□□□□□ -2.01
RAB38P57729 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RAB38P57729 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.52□□□□□ -2.01
RAB38P57729 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RAB38P57729 RNU6-859P-201ENST00000362728 107 ntBASIC2.52□□□□□ -2.01
RAB38P57729 RNU6-619P-201ENST00000365146 108 ntBASIC2.52□□□□□ -2.01
RAB38P57729 RNU6-650P-201ENST00000365658 111 ntBASIC2.52□□□□□ -2.01
RAB38P57729 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms