Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.39□□□□□ -1.87
PEX3P56589 SLC2A13P1-201ENST00000531560 322 ntBASIC3.39□□□□□ -1.87
PEX3P56589 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.39□□□□□ -1.87
PEX3P56589 OR4G1P-201ENST00000588632 938 ntBASIC3.39□□□□□ -1.87
PEX3P56589 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.39□□□□□ -1.87
PEX3P56589 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.39□□□□□ -1.87
PEX3P56589 DUXAP3-201ENST00000603616 594 ntBASIC3.39□□□□□ -1.87
PEX3P56589 AC007566.2-201ENST00000603642 413 ntBASIC3.39□□□□□ -1.87
PEX3P56589 AC025588.2-201ENST00000604851 466 ntBASIC3.39□□□□□ -1.87
PEX3P56589 AC093424.1-201ENST00000604999 338 ntBASIC3.39□□□□□ -1.87
PEX3P56589 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PEX3P56589 RNA5SP108-201ENST00000605921 117 ntBASIC3.39□□□□□ -1.87
PEX3P56589 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.39□□□□□ -1.87
PEX3P56589 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.39□□□□□ -1.87
PEX3P56589 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.39□□□□□ -1.87
PEX3P56589 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.39□□□□□ -1.87
PEX3P56589 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
PEX3P56589 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PEX3P56589 AP000776.1-201ENST00000530032 1663 ntBASIC3.39□□□□□ -1.87
PEX3P56589 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.39□□□□□ -1.87
PEX3P56589 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.38□□□□□ -1.87
PEX3P56589 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PEX3P56589 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.38□□□□□ -1.87
PEX3P56589 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PEX3P56589 SNRPEP3-201ENST00000338402 276 ntBASIC3.38□□□□□ -1.87
PEX3P56589 RNU6-805P-201ENST00000365643 106 ntBASIC3.38□□□□□ -1.87
PEX3P56589 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PEX3P56589 RSL24D1P4-201ENST00000400938 484 ntBASIC3.38□□□□□ -1.87
PEX3P56589 RPL7P25-201ENST00000404151 721 ntBASIC3.38□□□□□ -1.87
PEX3P56589 AL023807.1-201ENST00000407932 359 ntBASIC3.38□□□□□ -1.87
PEX3P56589 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
PEX3P56589 RNU2-28P-201ENST00000410457 189 ntBASIC3.38□□□□□ -1.87
PEX3P56589 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.38□□□□□ -1.87
PEX3P56589 HIGD1AP15-201ENST00000416198 280 ntBASIC3.38□□□□□ -1.87
PEX3P56589 AC005517.2-201ENST00000424673 553 ntBASIC3.38□□□□□ -1.87
PEX3P56589 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.38□□□□□ -1.87
PEX3P56589 RPS27P29-201ENST00000463110 252 ntBASIC3.38□□□□□ -1.87
PEX3P56589 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.38□□□□□ -1.87
PEX3P56589 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.38□□□□□ -1.87
PEX3P56589 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.38□□□□□ -1.87
PEX3P56589 TXNP6-201ENST00000510190 310 ntBASIC3.38□□□□□ -1.87
PEX3P56589 RNA5SP341-201ENST00000516261 117 ntBASIC3.38□□□□□ -1.87
PEX3P56589 SNORA74D-201ENST00000516404 141 ntBASIC3.38□□□□□ -1.87
PEX3P56589 RNU4-60P-201ENST00000517239 135 ntBASIC3.38□□□□□ -1.87
PEX3P56589 RN7SKP289-201ENST00000517244 295 ntBASIC3.38□□□□□ -1.87
PEX3P56589 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.38□□□□□ -1.87
PEX3P56589 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.38□□□□□ -1.87
PEX3P56589 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.38□□□□□ -1.87
PEX3P56589 PSMA2P1-201ENST00000526365 646 ntBASIC3.38□□□□□ -1.87
PEX3P56589 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.38□□□□□ -1.87
PEX3P56589 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PEX3P56589 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.38□□□□□ -1.87
PEX3P56589 AC009097.3-201ENST00000563557 1018 ntBASIC3.38□□□□□ -1.87
PEX3P56589 LARP7P2-201ENST00000575306 125 ntBASIC3.38□□□□□ -1.87
PEX3P56589 OR4K7P-201ENST00000580232 945 ntBASIC3.38□□□□□ -1.87
PEX3P56589 AC061975.8-201ENST00000587058 721 ntBASIC3.38□□□□□ -1.87
PEX3P56589 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.38□□□□□ -1.87
PEX3P56589 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.38□□□□□ -1.87
PEX3P56589 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.38□□□□□ -1.87
PEX3P56589 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.38□□□□□ -1.87
PEX3P56589 AC006539.2-201ENST00000601729 572 ntBASIC3.38□□□□□ -1.87
PEX3P56589 LLPHP1-201ENST00000603571 367 ntBASIC3.38□□□□□ -1.87
PEX3P56589 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.38□□□□□ -1.87
PEX3P56589 ZNF876P-202ENST00000398732 1485 ntBASIC3.38□□□□□ -1.87
PEX3P56589 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.38□□□□□ -1.87
PEX3P56589 CDR1-202ENST00000625883 1485 ntBASIC3.38□□□□□ -1.87
PEX3P56589 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PEX3P56589 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PEX3P56589 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PEX3P56589 AL353743.1-202ENST00000431724 1695 ntBASIC3.37□□□□□ -1.87
PEX3P56589 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
PEX3P56589 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PEX3P56589 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PEX3P56589 MIR22-201ENST00000362190 85 ntBASIC3.37□□□□□ -1.87
PEX3P56589 U3.11-201ENST00000364476 212 ntBASIC3.37□□□□□ -1.87
PEX3P56589 MIR591-201ENST00000385290 95 ntBASIC3.37□□□□□ -1.87
PEX3P56589 ARF4P3-201ENST00000397387 509 ntBASIC3.37□□□□□ -1.87
PEX3P56589 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.37□□□□□ -1.87
PEX3P56589 RN7SKP220-201ENST00000410611 288 ntBASIC3.37□□□□□ -1.87
PEX3P56589 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.37□□□□□ -1.87
PEX3P56589 RPL23AP22-201ENST00000437556 453 ntBASIC3.37□□□□□ -1.87
PEX3P56589 RPL23AP33-201ENST00000442301 452 ntBASIC3.37□□□□□ -1.87
PEX3P56589 AL590399.6-201ENST00000446396 307 ntBASIC3.37□□□□□ -1.87
PEX3P56589 RPL18AP17-201ENST00000455326 198 ntBASIC3.37□□□□□ -1.87
PEX3P56589 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.37□□□□□ -1.87
PEX3P56589 MTCO3P44-201ENST00000510977 541 ntBASIC3.37□□□□□ -1.87
PEX3P56589 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.37□□□□□ -1.87
PEX3P56589 RNU2-58P-201ENST00000516403 183 ntBASIC3.37□□□□□ -1.87
PEX3P56589 AC009812.2-201ENST00000517657 457 ntBASIC3.37□□□□□ -1.87
PEX3P56589 OR5D17P-201ENST00000531492 978 ntBASIC3.37□□□□□ -1.87
PEX3P56589 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.37□□□□□ -1.87
PEX3P56589 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.37□□□□□ -1.87
PEX3P56589 LSM6P2-201ENST00000552208 177 ntBASIC3.37□□□□□ -1.87
PEX3P56589 CENPUP2-201ENST00000555897 1186 ntBASIC3.37□□□□□ -1.87
PEX3P56589 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.37□□□□□ -1.87
PEX3P56589 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.37□□□□□ -1.87
PEX3P56589 AL162274.2-201ENST00000614406 332 ntBASIC3.37□□□□□ -1.87
PEX3P56589 AC231759.1-201ENST00000616455 597 ntBASIC3.37□□□□□ -1.87
PEX3P56589 AC092650.2-201ENST00000619984 902 ntBASIC3.37□□□□□ -1.87
PEX3P56589 AP002791.1-201ENST00000623291 381 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms