Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH11P55287 BNIP3P33-201ENST00000598912 569 ntBASIC3.45□□□□□ -1.86
CDH11P55287 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH11P55287 AC012065.4-201ENST00000602445 679 ntBASIC3.45□□□□□ -1.86
CDH11P55287 AL355812.1-201ENST00000603215 216 ntBASIC3.45□□□□□ -1.86
CDH11P55287 AL365503.1-201ENST00000605247 905 ntBASIC3.45□□□□□ -1.86
CDH11P55287 AC103710.3-201ENST00000608157 948 ntBASIC3.45□□□□□ -1.86
CDH11P55287 AC103710.4-201ENST00000609301 899 ntBASIC3.45□□□□□ -1.86
CDH11P55287 AC006329.2-201ENST00000611491 394 ntBASIC3.45□□□□□ -1.86
CDH11P55287 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.45□□□□□ -1.86
CDH11P55287 AC006133.1-201ENST00000617106 264 ntBASIC3.45□□□□□ -1.86
CDH11P55287 AL354798.1-201ENST00000622505 329 ntBASIC3.45□□□□□ -1.86
CDH11P55287 C2orf27A-204ENST00000623058 969 ntBASIC3.45□□□□□ -1.86
CDH11P55287 AC040168.1-201ENST00000623594 991 ntBASIC3.45□□□□□ -1.86
CDH11P55287 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH11P55287 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH11P55287 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
CDH11P55287 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CDH11P55287 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CDH11P55287 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDH11P55287 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDH11P55287 AC090337.1-201ENST00000579651 2074 ntBASIC3.44□□□□□ -1.86
CDH11P55287 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH11P55287 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH11P55287 RNU5F-6P-201ENST00000362979 116 ntBASIC3.44□□□□□ -1.86
CDH11P55287 RNU4-24P-201ENST00000364565 139 ntBASIC3.44□□□□□ -1.86
CDH11P55287 RNA5SP97-201ENST00000365006 84 ntBASIC3.44□□□□□ -1.86
CDH11P55287 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CDH11P55287 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CDH11P55287 MIR199A2-201ENST00000385289 110 ntBASIC3.44□□□□□ -1.86
CDH11P55287 AL590704.1-201ENST00000402856 794 ntBASIC3.44□□□□□ -1.86
CDH11P55287 AL391417.1-201ENST00000404100 426 ntBASIC3.44□□□□□ -1.86
CDH11P55287 MIR320C1-201ENST00000408566 88 ntBASIC3.44□□□□□ -1.86
CDH11P55287 RNU2-15P-201ENST00000410692 191 ntBASIC3.44□□□□□ -1.86
CDH11P55287 BTF3L4P1-201ENST00000413813 468 ntBASIC3.44□□□□□ -1.86
CDH11P55287 RPS27AP14-201ENST00000422868 454 ntBASIC3.44□□□□□ -1.86
CDH11P55287 AL445584.1-201ENST00000431451 330 ntBASIC3.44□□□□□ -1.86
CDH11P55287 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH11P55287 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.44□□□□□ -1.86
CDH11P55287 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH11P55287 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH11P55287 TBCAP1-201ENST00000436520 327 ntBASIC3.44□□□□□ -1.86
CDH11P55287 AC091862.1-201ENST00000438016 1100 ntBASIC3.44□□□□□ -1.86
CDH11P55287 THAP5P1-201ENST00000439089 262 ntBASIC3.44□□□□□ -1.86
CDH11P55287 SDCBPP1-201ENST00000440192 890 ntBASIC3.44□□□□□ -1.86
CDH11P55287 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH11P55287 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.44□□□□□ -1.86
CDH11P55287 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH11P55287 GDI2P2-201ENST00000445131 608 ntBASIC3.44□□□□□ -1.86
CDH11P55287 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.44□□□□□ -1.86
CDH11P55287 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH11P55287 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH11P55287 snoU109.4-201ENST00000458953 143 ntBASIC3.44□□□□□ -1.86
CDH11P55287 SNORD108-201ENST00000459332 71 ntBASIC3.44□□□□□ -1.86
CDH11P55287 OR9M1P-201ENST00000459641 921 ntBASIC3.44□□□□□ -1.86
CDH11P55287 RPL9P32-201ENST00000464118 620 ntBASIC3.44□□□□□ -1.86
CDH11P55287 AC087312.1-201ENST00000471411 480 ntBASIC3.44□□□□□ -1.86
CDH11P55287 AC116337.2-201ENST00000477662 156 ntBASIC3.44□□□□□ -1.86
CDH11P55287 AC106872.3-201ENST00000495104 446 ntBASIC3.44□□□□□ -1.86
CDH11P55287 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH11P55287 MTND5P4-201ENST00000514978 288 ntBASIC3.44□□□□□ -1.86
CDH11P55287 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDH11P55287 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH11P55287 AP003385.6-201ENST00000531603 374 ntBASIC3.44□□□□□ -1.86
CDH11P55287 AC013828.2-201ENST00000532487 235 ntBASIC3.44□□□□□ -1.86
CDH11P55287 AC024224.1-201ENST00000538284 609 ntBASIC3.44□□□□□ -1.86
CDH11P55287 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH11P55287 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH11P55287 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH11P55287 MTCYBP33-201ENST00000575007 1130 ntBASIC3.44□□□□□ -1.86
CDH11P55287 MIR4429-201ENST00000580105 73 ntBASIC3.44□□□□□ -1.86
CDH11P55287 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.44□□□□□ -1.86
CDH11P55287 MIR4307-201ENST00000582802 84 ntBASIC3.44□□□□□ -1.86
CDH11P55287 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.44□□□□□ -1.86
CDH11P55287 BBIP1P1-201ENST00000602999 279 ntBASIC3.44□□□□□ -1.86
CDH11P55287 AC064872.1-201ENST00000604823 1072 ntBASIC3.44□□□□□ -1.86
CDH11P55287 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDH11P55287 AC012360.2-201ENST00000609349 391 ntBASIC3.44□□□□□ -1.86
CDH11P55287 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.44□□□□□ -1.86
CDH11P55287 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDH11P55287 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDH11P55287 MTND5P3-201ENST00000438536 1800 ntBASIC3.44□□□□□ -1.86
CDH11P55287 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.44□□□□□ -1.86
CDH11P55287 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDH11P55287 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.43□□□□□ -1.86
CDH11P55287 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDH11P55287 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
CDH11P55287 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDH11P55287 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDH11P55287 MTND4P4-201ENST00000439033 1366 ntBASIC3.43□□□□□ -1.86
CDH11P55287 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDH11P55287 RNU6-28P-201ENST00000362378 107 ntBASIC3.43□□□□□ -1.86
CDH11P55287 RNU6-263P-201ENST00000363811 107 ntBASIC3.43□□□□□ -1.86
CDH11P55287 U3.15-201ENST00000365398 212 ntBASIC3.43□□□□□ -1.86
CDH11P55287 RNU6-744P-201ENST00000365557 107 ntBASIC3.43□□□□□ -1.86
CDH11P55287 RNU6-1316P-201ENST00000384242 108 ntBASIC3.43□□□□□ -1.86
CDH11P55287 RNU6-328P-201ENST00000390887 106 ntBASIC3.43□□□□□ -1.86
CDH11P55287 RNU6-821P-201ENST00000390995 107 ntBASIC3.43□□□□□ -1.86
CDH11P55287 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.43□□□□□ -1.86
CDH11P55287 AC109583.1-201ENST00000432156 268 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms