Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
POLR2JP52435 AL136360.1-201ENST00000503377 1900 ntBASIC1.94□□□□□ -2.1
POLR2JP52435 ANKRD36P1-201ENST00000344424 659 ntBASIC1.94□□□□□ -2.1
POLR2JP52435 SNORA11-201ENST00000408789 128 ntBASIC1.94□□□□□ -2.1
POLR2JP52435 Z92545.1-201ENST00000411782 234 ntBASIC1.94□□□□□ -2.1
POLR2JP52435 RPL17P12-201ENST00000413391 526 ntBASIC1.94□□□□□ -2.1
POLR2JP52435 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
POLR2JP52435 MORF4L1P6-201ENST00000418771 268 ntBASIC1.94□□□□□ -2.1
POLR2JP52435 SRIP2-201ENST00000428470 166 ntBASIC1.94□□□□□ -2.1
POLR2JP52435 RPS7P2-201ENST00000435134 607 ntBASIC1.94□□□□□ -2.1
POLR2JP52435 Z77249.1-201ENST00000444622 1175 ntBASIC1.94□□□□□ -2.1
POLR2JP52435 NPM1P13-201ENST00000452663 865 ntBASIC1.94□□□□□ -2.1
POLR2JP52435 RPS24P6-201ENST00000452670 400 ntBASIC1.94□□□□□ -2.1
POLR2JP52435 AC090096.1-201ENST00000489168 390 ntBASIC1.94□□□□□ -2.1
POLR2JP52435 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.94□□□□□ -2.1
POLR2JP52435 CDC42P4-201ENST00000510507 563 ntBASIC1.94□□□□□ -2.1
POLR2JP52435 RNA5SP364-201ENST00000516938 78 ntBASIC1.94□□□□□ -2.1
POLR2JP52435 IGKV2-36-201ENST00000519999 223 ntBASIC1.94□□□□□ -2.1
POLR2JP52435 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.94□□□□□ -2.1
POLR2JP52435 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.94□□□□□ -2.1
POLR2JP52435 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.94□□□□□ -2.1
POLR2JP52435 AP004371.1-201ENST00000525240 214 ntBASIC1.94□□□□□ -2.1
POLR2JP52435 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
POLR2JP52435 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.94□□□□□ -2.1
POLR2JP52435 AC121758.2-201ENST00000553271 193 ntBASIC1.94□□□□□ -2.1
POLR2JP52435 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.94□□□□□ -2.1
POLR2JP52435 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.94□□□□□ -2.1
POLR2JP52435 AC009097.3-201ENST00000563557 1018 ntBASIC1.94□□□□□ -2.1
POLR2JP52435 FAM60CP-201ENST00000591086 664 ntBASIC1.94□□□□□ -2.1
POLR2JP52435 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.94□□□□□ -2.1
POLR2JP52435 AC120053.1-201ENST00000607706 736 ntBASIC1.94□□□□□ -2.1
POLR2JP52435 AC005021.1-201ENST00000608730 355 ntBASIC1.94□□□□□ -2.1
POLR2JP52435 AC020923.1-201ENST00000624021 917 ntBASIC1.94□□□□□ -2.1
POLR2JP52435 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
POLR2JP52435 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
POLR2JP52435 ZNF734P-201ENST00000419494 1534 ntBASIC1.93□□□□□ -2.1
POLR2JP52435 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
POLR2JP52435 RNU6-185P-201ENST00000384421 107 ntBASIC1.93□□□□□ -2.1
POLR2JP52435 AC073264.1-201ENST00000411508 416 ntBASIC1.93□□□□□ -2.1
POLR2JP52435 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.93□□□□□ -2.1
POLR2JP52435 NDUFA5P10-201ENST00000432147 357 ntBASIC1.93□□□□□ -2.1
POLR2JP52435 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.93□□□□□ -2.1
POLR2JP52435 ELOCP13-201ENST00000443934 329 ntBASIC1.93□□□□□ -2.1
POLR2JP52435 BUD31P2-201ENST00000449374 300 ntBASIC1.93□□□□□ -2.1
POLR2JP52435 AP002345.1-201ENST00000456493 928 ntBASIC1.93□□□□□ -2.1
POLR2JP52435 snoU13.24-201ENST00000458998 104 ntBASIC1.93□□□□□ -2.1
POLR2JP52435 snoU13.7-201ENST00000459220 104 ntBASIC1.93□□□□□ -2.1
POLR2JP52435 AC010301.1-201ENST00000473936 355 ntBASIC1.93□□□□□ -2.1
POLR2JP52435 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.93□□□□□ -2.1
POLR2JP52435 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.93□□□□□ -2.1
POLR2JP52435 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.93□□□□□ -2.1
POLR2JP52435 AC087808.1-201ENST00000520501 361 ntBASIC1.93□□□□□ -2.1
POLR2JP52435 SUB1P1-201ENST00000524415 382 ntBASIC1.93□□□□□ -2.1
POLR2JP52435 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.93□□□□□ -2.1
POLR2JP52435 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
POLR2JP52435 AC026464.5-201ENST00000562497 722 ntBASIC1.93□□□□□ -2.1
POLR2JP52435 MIR3162-201ENST00000581818 82 ntBASIC1.93□□□□□ -2.1
POLR2JP52435 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.93□□□□□ -2.1
POLR2JP52435 AC020895.1-201ENST00000595362 272 ntBASIC1.93□□□□□ -2.1
POLR2JP52435 AC010378.1-201ENST00000619270 362 ntBASIC1.93□□□□□ -2.1
POLR2JP52435 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.93□□□□□ -2.1
POLR2JP52435 AC007998.5-201ENST00000622938 237 ntBASIC1.93□□□□□ -2.1
POLR2JP52435 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.93□□□□□ -2.1
POLR2JP52435 MTND4P35-201ENST00000604257 1375 ntBASIC1.93□□□□□ -2.1
POLR2JP52435 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.93□□□□□ -2.1
POLR2JP52435 Z82209.1-201ENST00000422141 2135 ntBASIC1.93□□□□□ -2.1
POLR2JP52435 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.92□□□□□ -2.1
POLR2JP52435 AC010680.1-201ENST00000590024 3590 ntBASIC1.92□□□□□ -2.1
POLR2JP52435 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
POLR2JP52435 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
POLR2JP52435 RNU1-73P-201ENST00000383971 164 ntBASIC1.92□□□□□ -2.1
POLR2JP52435 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
POLR2JP52435 U3.26-201ENST00000391236 204 ntBASIC1.92□□□□□ -2.1
POLR2JP52435 RNU4-53P-201ENST00000410828 140 ntBASIC1.92□□□□□ -2.1
POLR2JP52435 AL139156.1-201ENST00000412785 841 ntBASIC1.92□□□□□ -2.1
POLR2JP52435 MTCO3P4-201ENST00000419236 787 ntBASIC1.92□□□□□ -2.1
POLR2JP52435 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.92□□□□□ -2.1
POLR2JP52435 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.92□□□□□ -2.1
POLR2JP52435 UBE2D3P2-201ENST00000424409 445 ntBASIC1.92□□□□□ -2.1
POLR2JP52435 MORF4L1P7-201ENST00000426038 703 ntBASIC1.92□□□□□ -2.1
POLR2JP52435 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.92□□□□□ -2.1
POLR2JP52435 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.92□□□□□ -2.1
POLR2JP52435 HMGB1P26-201ENST00000452520 628 ntBASIC1.92□□□□□ -2.1
POLR2JP52435 HMGB1P15-201ENST00000453854 435 ntBASIC1.92□□□□□ -2.1
POLR2JP52435 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
POLR2JP52435 RNA5SP468-201ENST00000516782 93 ntBASIC1.92□□□□□ -2.1
POLR2JP52435 RN7SKP40-201ENST00000517211 242 ntBASIC1.92□□□□□ -2.1
POLR2JP52435 AC026241.1-201ENST00000517873 2142 ntBASIC1.92□□□□□ -2.1
POLR2JP52435 IGKV3-31-201ENST00000523109 329 ntBASIC1.92□□□□□ -2.1
POLR2JP52435 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
POLR2JP52435 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.92□□□□□ -2.1
POLR2JP52435 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.92□□□□□ -2.1
POLR2JP52435 AL137843.1-201ENST00000605078 385 ntBASIC1.92□□□□□ -2.1
POLR2JP52435 AC007275.1-201ENST00000621243 671 ntBASIC1.92□□□□□ -2.1
POLR2JP52435 MIR6873-201ENST00000622788 63 ntBASIC1.92□□□□□ -2.1
POLR2JP52435 ZNF37BP-203ENST00000452306 1352 ntBASIC1.92□□□□□ -2.1
POLR2JP52435 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
POLR2JP52435 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
POLR2JP52435 AC135776.4-201ENST00000624300 1904 ntBASIC1.91□□□□□ -2.1
POLR2JP52435 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms