Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RNA5SP143-201ENST00000516936 115 ntBASIC3.74□□□□□ -1.81
CLCNKAP51800 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.74□□□□□ -1.81
CLCNKAP51800 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.74□□□□□ -1.81
CLCNKAP51800 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.74□□□□□ -1.81
CLCNKAP51800 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLCNKAP51800 AP000873.5-201ENST00000533906 236 ntBASIC3.74□□□□□ -1.81
CLCNKAP51800 AC024224.1-201ENST00000538284 609 ntBASIC3.74□□□□□ -1.81
CLCNKAP51800 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.74□□□□□ -1.81
CLCNKAP51800 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.74□□□□□ -1.81
CLCNKAP51800 AC091489.2-201ENST00000566263 604 ntBASIC3.74□□□□□ -1.81
CLCNKAP51800 AC012213.3-201ENST00000577199 777 ntBASIC3.74□□□□□ -1.81
CLCNKAP51800 MIR544B-201ENST00000582372 78 ntBASIC3.74□□□□□ -1.81
CLCNKAP51800 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.74□□□□□ -1.81
CLCNKAP51800 AP000403.1-201ENST00000603349 851 ntBASIC3.74□□□□□ -1.81
CLCNKAP51800 RPL23AP92-201ENST00000603609 255 ntBASIC3.74□□□□□ -1.81
CLCNKAP51800 AC245389.1-201ENST00000605141 529 ntBASIC3.74□□□□□ -1.81
CLCNKAP51800 AC068276.1-201ENST00000605793 379 ntBASIC3.74□□□□□ -1.81
CLCNKAP51800 AC012557.2-201ENST00000605919 418 ntBASIC3.74□□□□□ -1.81
CLCNKAP51800 MIR486-1-201ENST00000612171 68 ntBASIC3.74□□□□□ -1.81
CLCNKAP51800 AL445264.1-201ENST00000621719 171 ntBASIC3.74□□□□□ -1.81
CLCNKAP51800 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.74□□□□□ -1.81
CLCNKAP51800 AC092656.1-203ENST00000624134 423 ntBASIC3.74□□□□□ -1.81
CLCNKAP51800 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.74□□□□□ -1.81
CLCNKAP51800 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLCNKAP51800 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
CLCNKAP51800 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLCNKAP51800 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLCNKAP51800 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.73□□□□□ -1.81
CLCNKAP51800 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
CLCNKAP51800 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLCNKAP51800 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.73□□□□□ -1.81
CLCNKAP51800 AL356473.1-201ENST00000406203 1408 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 RNVU1-3-201ENST00000364313 161 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 U8.11-201ENST00000384699 133 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 U8.12-201ENST00000384701 133 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 AL138880.1-201ENST00000405824 642 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 RN7SKP27-201ENST00000410684 333 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.73□□□□□ -1.81
CLCNKAP51800 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCNKAP51800 AL445669.1-201ENST00000426743 755 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 PSMA6P3-201ENST00000428242 164 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 AC018644.1-201ENST00000429934 551 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 AL445584.1-201ENST00000431451 330 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 MTCO3P5-201ENST00000433620 714 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCNKAP51800 MTND1P28-201ENST00000435623 950 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 RSU1P2-202ENST00000437884 485 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCNKAP51800 HSPE1P28-201ENST00000443139 211 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 USP9YP29-201ENST00000445112 563 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 Z95327.1-201ENST00000446082 482 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCNKAP51800 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCNKAP51800 U8.18-201ENST00000459285 133 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 RPL23AP62-201ENST00000463396 453 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 AC087312.1-201ENST00000471411 480 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 AC007537.2-201ENST00000472093 511 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 AP000797.1-201ENST00000478870 387 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 RPL21P129-201ENST00000491732 478 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 AC106872.3-201ENST00000495104 446 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 AP002812.1-201ENST00000495378 474 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 OR5H5P-201ENST00000503164 928 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 POU5F1P7-201ENST00000508759 541 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 AC034159.1-201ENST00000513885 583 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 AC025881.1-201ENST00000518851 512 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCNKAP51800 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.73□□□□□ -1.81
CLCNKAP51800 OR5AP1P-201ENST00000529730 940 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 AC068587.4-201ENST00000533893 186 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.73□□□□□ -1.81
CLCNKAP51800 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCNKAP51800 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCNKAP51800 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.73□□□□□ -1.81
CLCNKAP51800 MIR3158-1-201ENST00000583596 81 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.73□□□□□ -1.81
CLCNKAP51800 SNRPGP15-201ENST00000600149 222 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 AL390208.1-201ENST00000605885 644 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 RNU1-30P-201ENST00000606575 163 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.73□□□□□ -1.81
CLCNKAP51800 AC039056.2-201ENST00000622261 511 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 AC004009.2-201ENST00000623016 728 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 AC112200.1-201ENST00000625015 234 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.73□□□□□ -1.81
CLCNKAP51800 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.73□□□□□ -1.81
CLCNKAP51800 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.73□□□□□ -1.81
CLCNKAP51800 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.73□□□□□ -1.81
CLCNKAP51800 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLCNKAP51800 AP001148.1-201ENST00000624124 2359 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 NUP58P1-201ENST00000502546 1738 ntBASIC3.73□□□□□ -1.81
CLCNKAP51800 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
CLCNKAP51800 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.72□□□□□ -1.81
CLCNKAP51800 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLCNKAP51800 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.72□□□□□ -1.81
CLCNKAP51800 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLCNKAP51800 ZNF734P-201ENST00000419494 1534 ntBASIC3.72□□□□□ -1.81
CLCNKAP51800 Y_RNA.359-201ENST00000365498 102 ntBASIC3.72□□□□□ -1.81
CLCNKAP51800 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.72□□□□□ -1.81
CLCNKAP51800 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms