Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 USP9YP36-201ENST00000424581 829 ntBASIC4.99□□□□□ -1.61
MRE11P49959 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.99□□□□□ -1.61
MRE11P49959 HSFY6P-201ENST00000445573 403 ntBASIC4.99□□□□□ -1.61
MRE11P49959 RPL23AP15-201ENST00000450202 459 ntBASIC4.99□□□□□ -1.61
MRE11P49959 FABP3P2-201ENST00000453169 399 ntBASIC4.99□□□□□ -1.61
MRE11P49959 MTCO3P20-201ENST00000454926 688 ntBASIC4.99□□□□□ -1.61
MRE11P49959 AC092757.1-201ENST00000467293 467 ntBASIC4.99□□□□□ -1.61
MRE11P49959 AC112204.1-201ENST00000502591 103 ntBASIC4.99□□□□□ -1.61
MRE11P49959 AC022447.3-201ENST00000506865 495 ntBASIC4.99□□□□□ -1.61
MRE11P49959 AC105914.1-201ENST00000511798 226 ntBASIC4.99□□□□□ -1.61
MRE11P49959 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.99□□□□□ -1.61
MRE11P49959 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.99□□□□□ -1.61
MRE11P49959 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.99□□□□□ -1.61
MRE11P49959 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.99□□□□□ -1.61
MRE11P49959 OR5BC1P-201ENST00000529327 739 ntBASIC4.99□□□□□ -1.61
MRE11P49959 CENPUP2-201ENST00000555897 1186 ntBASIC4.99□□□□□ -1.61
MRE11P49959 AC025884.1-201ENST00000556034 378 ntBASIC4.99□□□□□ -1.61
MRE11P49959 MIR3682-201ENST00000581338 84 ntBASIC4.99□□□□□ -1.61
MRE11P49959 AC060780.3-201ENST00000589464 80 ntBASIC4.99□□□□□ -1.61
MRE11P49959 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.99□□□□□ -1.61
MRE11P49959 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MRE11P49959 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MRE11P49959 AC114781.5-201ENST00000615297 108 ntBASIC4.99□□□□□ -1.61
MRE11P49959 AC009033.1-201ENST00000624279 431 ntBASIC4.99□□□□□ -1.61
MRE11P49959 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.99□□□□□ -1.61
MRE11P49959 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
MRE11P49959 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.99□□□□□ -1.61
MRE11P49959 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
MRE11P49959 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
MRE11P49959 OR56B2P-202ENST00000641377 2453 ntBASIC4.99□□□□□ -1.61
MRE11P49959 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
MRE11P49959 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
MRE11P49959 BDP1P-201ENST00000582658 1990 ntBASIC4.98□□□□□ -1.61
MRE11P49959 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
MRE11P49959 USP9YP4-201ENST00000424401 1745 ntBASIC4.98□□□□□ -1.61
MRE11P49959 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
MRE11P49959 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.98□□□□□ -1.61
MRE11P49959 U8.3-201ENST00000363321 132 ntBASIC4.98□□□□□ -1.61
MRE11P49959 RNU4-76P-201ENST00000364509 141 ntBASIC4.98□□□□□ -1.61
MRE11P49959 RNU6-1009P-201ENST00000390996 107 ntBASIC4.98□□□□□ -1.61
MRE11P49959 SNORD66.1-201ENST00000391230 76 ntBASIC4.98□□□□□ -1.61
MRE11P49959 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.98□□□□□ -1.61
MRE11P49959 MTCO1P20-201ENST00000425366 358 ntBASIC4.98□□□□□ -1.61
MRE11P49959 AL445669.1-201ENST00000426743 755 ntBASIC4.98□□□□□ -1.61
MRE11P49959 AC011742.1-201ENST00000431448 434 ntBASIC4.98□□□□□ -1.61
MRE11P49959 RPL37P1-201ENST00000432310 284 ntBASIC4.98□□□□□ -1.61
MRE11P49959 AC023347.2-201ENST00000433994 462 ntBASIC4.98□□□□□ -1.61
MRE11P49959 AL132765.1-201ENST00000434165 553 ntBASIC4.98□□□□□ -1.61
MRE11P49959 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.98□□□□□ -1.61
MRE11P49959 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.98□□□□□ -1.61
MRE11P49959 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.98□□□□□ -1.61
MRE11P49959 AC079448.1-201ENST00000449377 373 ntBASIC4.98□□□□□ -1.61
MRE11P49959 AL162388.1-201ENST00000450912 352 ntBASIC4.98□□□□□ -1.61
MRE11P49959 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.98□□□□□ -1.61
MRE11P49959 BX322784.1-201ENST00000455793 1077 ntBASIC4.98□□□□□ -1.61
MRE11P49959 RPS5P7-201ENST00000456664 608 ntBASIC4.98□□□□□ -1.61
MRE11P49959 MTCO1P42-201ENST00000457379 726 ntBASIC4.98□□□□□ -1.61
MRE11P49959 RPL23AP24-201ENST00000458203 385 ntBASIC4.98□□□□□ -1.61
MRE11P49959 RNU7-136P-201ENST00000458819 69 ntBASIC4.98□□□□□ -1.61
MRE11P49959 AC023598.1-201ENST00000472521 361 ntBASIC4.98□□□□□ -1.61
MRE11P49959 RPL36AP41-201ENST00000493820 306 ntBASIC4.98□□□□□ -1.61
MRE11P49959 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.98□□□□□ -1.61
MRE11P49959 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.98□□□□□ -1.61
MRE11P49959 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
MRE11P49959 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.98□□□□□ -1.61
MRE11P49959 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.98□□□□□ -1.61
MRE11P49959 RNU6-488P-201ENST00000515918 99 ntBASIC4.98□□□□□ -1.61
MRE11P49959 Y_RNA.704-201ENST00000516851 102 ntBASIC4.98□□□□□ -1.61
MRE11P49959 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.98□□□□□ -1.61
MRE11P49959 AP003122.4-201ENST00000530980 758 ntBASIC4.98□□□□□ -1.61
MRE11P49959 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.98□□□□□ -1.61
MRE11P49959 SULT1C2P1-202ENST00000562418 459 ntBASIC4.98□□□□□ -1.61
MRE11P49959 MIR3200-201ENST00000580767 85 ntBASIC4.98□□□□□ -1.61
MRE11P49959 MIR4637-201ENST00000582405 84 ntBASIC4.98□□□□□ -1.61
MRE11P49959 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
MRE11P49959 AL121757.2-201ENST00000611223 313 ntBASIC4.98□□□□□ -1.61
MRE11P49959 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.98□□□□□ -1.61
MRE11P49959 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
MRE11P49959 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
MRE11P49959 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
MRE11P49959 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
MRE11P49959 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
MRE11P49959 AC092326.2-201ENST00000624772 1561 ntBASIC4.97□□□□□ -1.61
MRE11P49959 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
MRE11P49959 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
MRE11P49959 RNU6-984P-201ENST00000363236 109 ntBASIC4.97□□□□□ -1.61
MRE11P49959 RNU6-1103P-201ENST00000384150 107 ntBASIC4.97□□□□□ -1.61
MRE11P49959 RNU6-1011P-201ENST00000384668 107 ntBASIC4.97□□□□□ -1.61
MRE11P49959 SNORD115.1-201ENST00000391109 76 ntBASIC4.97□□□□□ -1.61
MRE11P49959 Z98745.1-201ENST00000402553 494 ntBASIC4.97□□□□□ -1.61
MRE11P49959 HMGB1P17-201ENST00000403495 628 ntBASIC4.97□□□□□ -1.61
MRE11P49959 RNU6-195P-201ENST00000411352 109 ntBASIC4.97□□□□□ -1.61
MRE11P49959 CYCSP19-201ENST00000411715 316 ntBASIC4.97□□□□□ -1.61
MRE11P49959 USP9YP27-201ENST00000418455 438 ntBASIC4.97□□□□□ -1.61
MRE11P49959 RWDD4P2-201ENST00000426392 563 ntBASIC4.97□□□□□ -1.61
MRE11P49959 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.97□□□□□ -1.61
MRE11P49959 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.97□□□□□ -1.61
MRE11P49959 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.97□□□□□ -1.61
MRE11P49959 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.97□□□□□ -1.61
MRE11P49959 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms