Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 AC027309.3-201ENST00000623419 351 ntBASIC1.88□□□□□ -2.11
RPL28P46779 CR381653.2-201ENST00000624041 768 ntBASIC1.88□□□□□ -2.11
RPL28P46779 AC132825.7-201ENST00000638744 335 ntBASIC1.88□□□□□ -2.11
RPL28P46779 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.87□□□□□ -2.11
RPL28P46779 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
RPL28P46779 OFD1P6Y-202ENST00000451061 2724 ntBASIC1.87□□□□□ -2.11
RPL28P46779 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
RPL28P46779 SNORA71.3-201ENST00000362582 128 ntBASIC1.87□□□□□ -2.11
RPL28P46779 RNU6-251P-201ENST00000363235 104 ntBASIC1.87□□□□□ -2.11
RPL28P46779 SNORA71.1-201ENST00000364523 117 ntBASIC1.87□□□□□ -2.11
RPL28P46779 SNORA51.6-201ENST00000384151 125 ntBASIC1.87□□□□□ -2.11
RPL28P46779 RNVU1-14-201ENST00000384770 164 ntBASIC1.87□□□□□ -2.11
RPL28P46779 AL356057.2-201ENST00000403318 432 ntBASIC1.87□□□□□ -2.11
RPL28P46779 AL137014.1-201ENST00000420490 1226 ntBASIC1.87□□□□□ -2.11
RPL28P46779 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.87□□□□□ -2.11
RPL28P46779 RPL27AP8-201ENST00000424277 446 ntBASIC1.87□□□□□ -2.11
RPL28P46779 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.87□□□□□ -2.11
RPL28P46779 AC234781.2-201ENST00000426370 994 ntBASIC1.87□□□□□ -2.11
RPL28P46779 AC005300.1-201ENST00000428401 373 ntBASIC1.87□□□□□ -2.11
RPL28P46779 AC005345.1-201ENST00000431868 217 ntBASIC1.87□□□□□ -2.11
RPL28P46779 LSM1P1-201ENST00000438629 273 ntBASIC1.87□□□□□ -2.11
RPL28P46779 MRPL50P4-201ENST00000446432 475 ntBASIC1.87□□□□□ -2.11
RPL28P46779 AL162389.1-201ENST00000449233 177 ntBASIC1.87□□□□□ -2.11
RPL28P46779 AC112492.1-201ENST00000449607 712 ntBASIC1.87□□□□□ -2.11
RPL28P46779 AC009961.3-201ENST00000449832 765 ntBASIC1.87□□□□□ -2.11
RPL28P46779 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RPL28P46779 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.87□□□□□ -2.11
RPL28P46779 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.87□□□□□ -2.11
RPL28P46779 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC1.87□□□□□ -2.11
RPL28P46779 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC1.87□□□□□ -2.11
RPL28P46779 RPL21P47-201ENST00000483696 477 ntBASIC1.87□□□□□ -2.11
RPL28P46779 OR2A20P-203ENST00000498397 1268 ntBASIC1.87□□□□□ -2.11
RPL28P46779 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.87□□□□□ -2.11
RPL28P46779 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.87□□□□□ -2.11
RPL28P46779 LEF1-218ENST00000512172 598 ntTSL 2 BASIC1.87□□□□□ -2.11
RPL28P46779 AC090136.1-201ENST00000520009 240 ntBASIC1.87□□□□□ -2.11
RPL28P46779 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.87□□□□□ -2.11
RPL28P46779 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.87□□□□□ -2.11
RPL28P46779 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.87□□□□□ -2.11
RPL28P46779 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.87□□□□□ -2.11
RPL28P46779 CASC16-202ENST00000563844 610 ntTSL 3 BASIC1.87□□□□□ -2.11
RPL28P46779 UBL5P2-201ENST00000583788 219 ntBASIC1.87□□□□□ -2.11
RPL28P46779 GAS5-AS1-201ENST00000602767 694 ntBASIC1.87□□□□□ -2.11
RPL28P46779 AL022099.1-201ENST00000604551 712 ntBASIC1.87□□□□□ -2.11
RPL28P46779 AL137843.1-201ENST00000605078 385 ntBASIC1.87□□□□□ -2.11
RPL28P46779 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC1.87□□□□□ -2.11
RPL28P46779 AC100793.4-201ENST00000613683 429 ntBASIC1.87□□□□□ -2.11
RPL28P46779 MIR7112-201ENST00000616126 65 ntBASIC1.87□□□□□ -2.11
RPL28P46779 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.87□□□□□ -2.11
RPL28P46779 AL121594.5-201ENST00000631724 573 ntBASIC1.87□□□□□ -2.11
RPL28P46779 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC1.87□□□□□ -2.11
RPL28P46779 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC1.87□□□□□ -2.11
RPL28P46779 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.86□□□□□ -2.11
RPL28P46779 AC080100.1-201ENST00000624239 5356 ntBASIC1.86□□□□□ -2.11
RPL28P46779 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RPL28P46779 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RPL28P46779 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC1.86□□□□□ -2.11
RPL28P46779 MIR26A1-201ENST00000362205 77 ntBASIC1.86□□□□□ -2.11
RPL28P46779 SNORA9.2-201ENST00000365361 133 ntBASIC1.86□□□□□ -2.11
RPL28P46779 RNU6-851P-201ENST00000384565 107 ntBASIC1.86□□□□□ -2.11
RPL28P46779 SNORD67-201ENST00000390833 111 ntBASIC1.86□□□□□ -2.11
RPL28P46779 AL139098.1-201ENST00000407291 389 ntBASIC1.86□□□□□ -2.11
RPL28P46779 BX682237.1-201ENST00000415016 335 ntBASIC1.86□□□□□ -2.11
RPL28P46779 AL513477.1-202ENST00000417061 214 ntBASIC1.86□□□□□ -2.11
RPL28P46779 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC1.86□□□□□ -2.11
RPL28P46779 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.86□□□□□ -2.11
RPL28P46779 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.86□□□□□ -2.11
RPL28P46779 AC002542.1-201ENST00000440683 193 ntBASIC1.86□□□□□ -2.11
RPL28P46779 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC1.86□□□□□ -2.11
RPL28P46779 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC1.86□□□□□ -2.11
RPL28P46779 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.86□□□□□ -2.11
RPL28P46779 RNU6-775P-201ENST00000459318 96 ntBASIC1.86□□□□□ -2.11
RPL28P46779 RPS4XP10-201ENST00000465034 731 ntBASIC1.86□□□□□ -2.11
RPL28P46779 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC1.86□□□□□ -2.11
RPL28P46779 KC877373.1-201ENST00000479066 408 ntBASIC1.86□□□□□ -2.11
RPL28P46779 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.86□□□□□ -2.11
RPL28P46779 AC006390.1-201ENST00000508068 283 ntBASIC1.86□□□□□ -2.11
RPL28P46779 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.86□□□□□ -2.11
RPL28P46779 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.86□□□□□ -2.11
RPL28P46779 AC026241.1-201ENST00000517873 2142 ntBASIC1.86□□□□□ -2.11
RPL28P46779 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.86□□□□□ -2.11
RPL28P46779 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC1.86□□□□□ -2.11
RPL28P46779 MTCO1P47-201ENST00000523889 1271 ntBASIC1.86□□□□□ -2.11
RPL28P46779 CASP1P1-201ENST00000526345 212 ntBASIC1.86□□□□□ -2.11
RPL28P46779 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
RPL28P46779 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
RPL28P46779 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC1.86□□□□□ -2.11
RPL28P46779 AL133271.1-201ENST00000538229 291 ntBASIC1.86□□□□□ -2.11
RPL28P46779 HPRT1P3-201ENST00000539521 576 ntBASIC1.86□□□□□ -2.11
RPL28P46779 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.86□□□□□ -2.11
RPL28P46779 CCNG2P1-201ENST00000549521 1000 ntBASIC1.86□□□□□ -2.11
RPL28P46779 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.86□□□□□ -2.11
RPL28P46779 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC1.86□□□□□ -2.11
RPL28P46779 RPL21P12-201ENST00000559810 515 ntBASIC1.86□□□□□ -2.11
RPL28P46779 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC1.86□□□□□ -2.11
RPL28P46779 AC011260.1-201ENST00000578420 472 ntBASIC1.86□□□□□ -2.11
RPL28P46779 AC138761.3-201ENST00000579993 334 ntBASIC1.86□□□□□ -2.11
RPL28P46779 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC1.86□□□□□ -2.11
RPL28P46779 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.86□□□□□ -2.11
RPL28P46779 BNIP3P33-201ENST00000598912 569 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms