Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC009969.1-201ENST00000438726 172 ntBASIC3.19□□□□□ -1.9
HMGCLP35914 AL139824.2-201ENST00000458731 1095 ntBASIC3.19□□□□□ -1.9
HMGCLP35914 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCLP35914 AC108078.3-201ENST00000502633 489 ntBASIC3.19□□□□□ -1.9
HMGCLP35914 OR5H5P-201ENST00000503164 928 ntBASIC3.19□□□□□ -1.9
HMGCLP35914 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCLP35914 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCLP35914 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCLP35914 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HMGCLP35914 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HMGCLP35914 AC092470.1-201ENST00000546187 132 ntBASIC3.19□□□□□ -1.9
HMGCLP35914 AC090502.2-201ENST00000549267 280 ntBASIC3.19□□□□□ -1.9
HMGCLP35914 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.19□□□□□ -1.9
HMGCLP35914 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCLP35914 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCLP35914 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCLP35914 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCLP35914 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.19□□□□□ -1.9
HMGCLP35914 SRGNP1-201ENST00000603392 451 ntBASIC3.19□□□□□ -1.9
HMGCLP35914 AC007566.2-201ENST00000603642 413 ntBASIC3.19□□□□□ -1.9
HMGCLP35914 AC092954.1-201ENST00000609121 445 ntBASIC3.19□□□□□ -1.9
HMGCLP35914 AC107294.3-201ENST00000609211 526 ntBASIC3.19□□□□□ -1.9
HMGCLP35914 AC021755.4-201ENST00000616620 456 ntBASIC3.19□□□□□ -1.9
HMGCLP35914 AC138932.5-201ENST00000617759 563 ntBASIC3.19□□□□□ -1.9
HMGCLP35914 AC091903.1-201ENST00000624322 454 ntBASIC3.19□□□□□ -1.9
HMGCLP35914 MIR1322-201ENST00000638013 71 ntBASIC3.19□□□□□ -1.9
HMGCLP35914 MTND5P1-201ENST00000445440 1375 ntBASIC3.19□□□□□ -1.9
HMGCLP35914 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
HMGCLP35914 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
HMGCLP35914 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
HMGCLP35914 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HMGCLP35914 RNU6-657P-201ENST00000383904 107 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 SAR1AP2-201ENST00000392696 594 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 AL583834.1-201ENST00000406943 343 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 RNA5SP44-201ENST00000410446 133 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 AC073264.1-201ENST00000411508 416 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGCLP35914 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGCLP35914 AC245291.1-201ENST00000419501 328 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 AL451062.2-201ENST00000427515 271 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 BX890604.2-201ENST00000427883 474 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGCLP35914 ATP5F1P1-201ENST00000433775 569 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 AC091862.1-201ENST00000438016 1100 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 HSPE1P28-201ENST00000443139 211 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGCLP35914 RPL7P52-201ENST00000449200 742 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 SSXP4-201ENST00000451349 245 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGCLP35914 AC104308.1-201ENST00000454621 333 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 RPL18AP17-201ENST00000455326 198 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGCLP35914 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.18□□□□□ -1.9
HMGCLP35914 PABPC1P3-201ENST00000469174 459 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 AC013828.1-201ENST00000481845 158 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 RPL23AP55-201ENST00000498163 452 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGCLP35914 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGCLP35914 MTCYBP35-201ENST00000503630 1137 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 AC114967.1-201ENST00000504890 259 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HMGCLP35914 AC116353.3-201ENST00000511215 249 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 AC109445.1-201ENST00000512356 383 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 SLC2A13P1-201ENST00000531560 322 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.18□□□□□ -1.9
HMGCLP35914 AC023538.1-201ENST00000534576 736 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.18□□□□□ -1.9
HMGCLP35914 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.18□□□□□ -1.9
HMGCLP35914 LRRC34P1-201ENST00000542742 915 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGCLP35914 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGCLP35914 SNRPGP15-201ENST00000600149 222 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGCLP35914 AP000770.2-201ENST00000623694 100 ntBASIC3.18□□□□□ -1.9
HMGCLP35914 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGCLP35914 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
HMGCLP35914 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.18□□□□□ -1.9
HMGCLP35914 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HMGCLP35914 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HMGCLP35914 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
HMGCLP35914 OR1S2-201ENST00000302592 978 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 FAM133CP-201ENST00000332869 704 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 RNA5SP383-201ENST00000362934 120 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 U3.11-201ENST00000364476 212 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 Y_RNA.311-201ENST00000365068 96 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 ARF4P3-201ENST00000397387 509 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 AL355379.1-201ENST00000405542 640 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.17□□□□□ -1.9
HMGCLP35914 HMGB3P23-201ENST00000414981 585 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 NDUFB4P5-201ENST00000415445 361 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 AL008987.1-201ENST00000415528 237 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 VPS26BP1-201ENST00000417155 755 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 AC244098.2-201ENST00000422068 99 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.17□□□□□ -1.9
HMGCLP35914 OR2B8P-201ENST00000432841 938 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 FGF7P5-201ENST00000441829 291 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.17□□□□□ -1.9
HMGCLP35914 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGCLP35914 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.17□□□□□ -1.9
HMGCLP35914 ST13P14-201ENST00000474095 734 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms