Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC008962.1-201ENST00000605729 304 ntBASIC3.82□□□□□ -1.8
HOXC13P31276 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXC13P31276 SNORA50A-202ENST00000629536 136 ntBASIC3.82□□□□□ -1.8
HOXC13P31276 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.82□□□□□ -1.8
HOXC13P31276 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.82□□□□□ -1.8
HOXC13P31276 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXC13P31276 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.82□□□□□ -1.8
HOXC13P31276 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HOXC13P31276 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC13P31276 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC13P31276 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC13P31276 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
HOXC13P31276 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC13P31276 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC13P31276 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HOXC13P31276 RNU1-18P-201ENST00000363062 164 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC13P31276 Y_RNA.436-201ENST00000384097 102 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 RNU6-413P-201ENST00000384115 107 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 AL354719.1-201ENST00000406535 843 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 FAT1P1-201ENST00000406588 507 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC13P31276 DBIP2-201ENST00000419076 262 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC13P31276 AL589823.1-201ENST00000429577 183 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXC13P31276 MTND2P5-201ENST00000432656 1006 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 NDUFB1P1-201ENST00000435191 180 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC13P31276 AC007327.1-201ENST00000447461 264 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 AL589880.1-201ENST00000448271 287 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC13P31276 ZNF886P-201ENST00000450781 723 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 RPL26P28-201ENST00000451325 435 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC13P31276 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXC13P31276 AL049873.1-201ENST00000480540 376 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC13P31276 AF213884.2-201ENST00000510417 903 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.81□□□□□ -1.8
HOXC13P31276 RN7SKP31-201ENST00000516354 278 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.81□□□□□ -1.8
HOXC13P31276 AC134698.4-201ENST00000523451 826 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.81□□□□□ -1.8
HOXC13P31276 AL132857.1-201ENST00000555180 708 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXC13P31276 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC13P31276 FAM60BP-201ENST00000578364 658 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC13P31276 BNIP3P26-201ENST00000600827 554 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 RPP40P2-201ENST00000603596 712 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 HMGB1P50-201ENST00000605814 607 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 AC135507.1-201ENST00000607214 561 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 AC021755.4-201ENST00000616620 456 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC13P31276 AC243312.2-201ENST00000623340 601 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 AC120349.2-201ENST00000625002 298 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 U6.101-201ENST00000637707 76 ntBASIC3.81□□□□□ -1.8
HOXC13P31276 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC13P31276 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.81□□□□□ -1.8
HOXC13P31276 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC13P31276 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HOXC13P31276 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC13P31276 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC13P31276 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.8□□□□□ -1.8
HOXC13P31276 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
HOXC13P31276 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC13P31276 ZNF826P-207ENST00000622273 1910 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 AC109315.1-201ENST00000584143 1347 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 SNRPEP3-201ENST00000338402 276 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 NACA3P-201ENST00000359690 648 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 U3.29-201ENST00000391296 212 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 AL122016.1-201ENST00000403365 367 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 HSPE1P8-201ENST00000406997 288 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 MIR1302-8-201ENST00000408342 128 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 RNU2-15P-201ENST00000410692 191 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXC13P31276 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXC13P31276 AC005300.1-201ENST00000428401 373 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXC13P31276 AC010153.1-201ENST00000432862 727 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 RABEPKP1-201ENST00000440529 1026 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 ELOCP30-201ENST00000447108 299 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 RPL39P6-201ENST00000448289 150 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC13P31276 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXC13P31276 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC13P31276 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.8□□□□□ -1.8
HOXC13P31276 AC099563.1-201ENST00000456086 418 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 SNORD105B-201ENST00000458770 79 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 SNORD11.1-201ENST00000459482 85 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 ST13P14-201ENST00000474095 734 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 AC006483.1-201ENST00000487308 313 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 AC010486.2-201ENST00000505572 483 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 AC011352.1-201ENST00000512300 793 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXC13P31276 RN7SKP18-201ENST00000516005 275 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 RNU1-103P-201ENST00000516502 125 ntBASIC3.8□□□□□ -1.8
HOXC13P31276 MTND1P5-201ENST00000517906 940 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms