Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 HMGN1P24-201ENST00000412282 298 ntBASIC3.97□□□□□ -1.77
CD53P19397 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.97□□□□□ -1.77
CD53P19397 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.97□□□□□ -1.77
CD53P19397 ZNF885P-201ENST00000420174 1098 ntBASIC3.97□□□□□ -1.77
CD53P19397 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.97□□□□□ -1.77
CD53P19397 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.97□□□□□ -1.77
CD53P19397 RPL7AP25-201ENST00000423357 805 ntBASIC3.97□□□□□ -1.77
CD53P19397 RBMY1KP-201ENST00000423480 476 ntBASIC3.97□□□□□ -1.77
CD53P19397 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.97□□□□□ -1.77
CD53P19397 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.97□□□□□ -1.77
CD53P19397 AC114495.1-201ENST00000441274 436 ntBASIC3.97□□□□□ -1.77
CD53P19397 MTND1P29-201ENST00000448112 647 ntBASIC3.97□□□□□ -1.77
CD53P19397 NUTF2P3-201ENST00000448540 384 ntBASIC3.97□□□□□ -1.77
CD53P19397 AL162389.1-201ENST00000449233 177 ntBASIC3.97□□□□□ -1.77
CD53P19397 ABCF2P2-201ENST00000450549 296 ntBASIC3.97□□□□□ -1.77
CD53P19397 HMGB3P22-202ENST00000451823 572 ntBASIC3.97□□□□□ -1.77
CD53P19397 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.97□□□□□ -1.77
CD53P19397 RNU6-420P-201ENST00000458780 107 ntBASIC3.97□□□□□ -1.77
CD53P19397 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CD53P19397 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.97□□□□□ -1.77
CD53P19397 RPL21P129-201ENST00000491732 478 ntBASIC3.97□□□□□ -1.77
CD53P19397 AC091435.1-201ENST00000505442 584 ntBASIC3.97□□□□□ -1.77
CD53P19397 OR5BM1P-201ENST00000512021 366 ntBASIC3.97□□□□□ -1.77
CD53P19397 IGLVIV-65-201ENST00000517313 360 ntBASIC3.97□□□□□ -1.77
CD53P19397 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.97□□□□□ -1.77
CD53P19397 AL133271.1-201ENST00000538229 291 ntBASIC3.97□□□□□ -1.77
CD53P19397 OR7K1P-201ENST00000546439 926 ntBASIC3.97□□□□□ -1.77
CD53P19397 OR4H12P-201ENST00000556269 907 ntBASIC3.97□□□□□ -1.77
CD53P19397 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.97□□□□□ -1.77
CD53P19397 ARF4P1-201ENST00000605447 541 ntBASIC3.97□□□□□ -1.77
CD53P19397 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.97□□□□□ -1.77
CD53P19397 AC093838.1-201ENST00000613014 469 ntBASIC3.97□□□□□ -1.77
CD53P19397 AC122133.1-201ENST00000613964 233 ntBASIC3.97□□□□□ -1.77
CD53P19397 AF246928.1-201ENST00000623768 87 ntBASIC3.97□□□□□ -1.77
CD53P19397 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CD53P19397 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CD53P19397 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.97□□□□□ -1.77
CD53P19397 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CD53P19397 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
CD53P19397 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CD53P19397 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CD53P19397 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
CD53P19397 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.96□□□□□ -1.77
CD53P19397 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
CD53P19397 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CD53P19397 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.78
CD53P19397 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD53P19397 CPHL1P-201ENST00000461341 3407 ntBASIC3.96□□□□□ -1.78
CD53P19397 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.96□□□□□ -1.78
CD53P19397 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.96□□□□□ -1.78
CD53P19397 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD53P19397 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CD53P19397 Y_RNA.436-201ENST00000384097 102 ntBASIC3.96□□□□□ -1.78
CD53P19397 MIR23A-201ENST00000385245 73 ntBASIC3.96□□□□□ -1.78
CD53P19397 MIR134-201ENST00000385258 73 ntBASIC3.96□□□□□ -1.78
CD53P19397 SAR1AP2-201ENST00000392696 594 ntBASIC3.96□□□□□ -1.78
CD53P19397 AC025750.1-201ENST00000399891 379 ntBASIC3.96□□□□□ -1.78
CD53P19397 JKAMPP1-201ENST00000413804 919 ntBASIC3.96□□□□□ -1.78
CD53P19397 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.96□□□□□ -1.78
CD53P19397 SPA17P1-201ENST00000416656 452 ntBASIC3.96□□□□□ -1.78
CD53P19397 RPS29P17-201ENST00000430795 166 ntBASIC3.96□□□□□ -1.78
CD53P19397 AL451050.1-201ENST00000450126 415 ntBASIC3.96□□□□□ -1.78
CD53P19397 RPS27AP8-201ENST00000452665 445 ntBASIC3.96□□□□□ -1.78
CD53P19397 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.96□□□□□ -1.78
CD53P19397 AL031183.1-201ENST00000457667 207 ntBASIC3.96□□□□□ -1.78
CD53P19397 RPL31P3-201ENST00000458430 332 ntBASIC3.96□□□□□ -1.78
CD53P19397 RPS20P20-201ENST00000460498 340 ntBASIC3.96□□□□□ -1.78
CD53P19397 AC104472.2-201ENST00000469035 601 ntBASIC3.96□□□□□ -1.78
CD53P19397 RPL21P126-201ENST00000470049 478 ntBASIC3.96□□□□□ -1.78
CD53P19397 AC017037.1-201ENST00000508460 471 ntBASIC3.96□□□□□ -1.78
CD53P19397 MIR2116-201ENST00000517221 80 ntBASIC3.96□□□□□ -1.78
CD53P19397 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.96□□□□□ -1.78
CD53P19397 AP004247.1-201ENST00000531556 1289 ntBASIC3.96□□□□□ -1.78
CD53P19397 AP000867.2-201ENST00000532468 320 ntBASIC3.96□□□□□ -1.78
CD53P19397 AC023161.2-201ENST00000551218 780 ntBASIC3.96□□□□□ -1.78
CD53P19397 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.96□□□□□ -1.78
CD53P19397 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.96□□□□□ -1.78
CD53P19397 AC106785.1-201ENST00000565935 262 ntBASIC3.96□□□□□ -1.78
CD53P19397 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.96□□□□□ -1.78
CD53P19397 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.96□□□□□ -1.78
CD53P19397 AC135628.1-201ENST00000568867 534 ntBASIC3.96□□□□□ -1.78
CD53P19397 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.96□□□□□ -1.78
CD53P19397 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.96□□□□□ -1.78
CD53P19397 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.96□□□□□ -1.78
CD53P19397 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.96□□□□□ -1.78
CD53P19397 MIR4999-201ENST00000585029 91 ntBASIC3.96□□□□□ -1.78
CD53P19397 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.96□□□□□ -1.78
CD53P19397 BNIP3P22-201ENST00000593399 556 ntBASIC3.96□□□□□ -1.78
CD53P19397 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.96□□□□□ -1.78
CD53P19397 AC013553.2-201ENST00000604244 589 ntBASIC3.96□□□□□ -1.78
CD53P19397 AL445567.2-201ENST00000618935 498 ntBASIC3.96□□□□□ -1.78
CD53P19397 AC007494.3-201ENST00000624660 743 ntBASIC3.96□□□□□ -1.78
CD53P19397 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.96□□□□□ -1.78
CD53P19397 SNORA50A-202ENST00000629536 136 ntBASIC3.96□□□□□ -1.78
CD53P19397 OR5H6-203ENST00000642105 978 ntBASIC3.96□□□□□ -1.78
CD53P19397 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.96□□□□□ -1.78
CD53P19397 AC016588.2-201ENST00000632484 3021 ntBASIC3.96□□□□□ -1.78
CD53P19397 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD53P19397 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD53P19397 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms