Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 Y_RNA.367-201ENST00000365544 101 ntBASIC5.58□□□□□ -1.52
LIG1P18858 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LIG1P18858 E2F6P2-201ENST00000420708 748 ntBASIC5.58□□□□□ -1.52
LIG1P18858 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LIG1P18858 RPL36P19-201ENST00000430744 301 ntBASIC5.58□□□□□ -1.52
LIG1P18858 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.58□□□□□ -1.52
LIG1P18858 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LIG1P18858 AL354714.3-201ENST00000447284 493 ntBASIC5.58□□□□□ -1.52
LIG1P18858 AC000111.2-201ENST00000448200 210 ntBASIC5.58□□□□□ -1.52
LIG1P18858 NANOGP10-201ENST00000453325 895 ntBASIC5.58□□□□□ -1.52
LIG1P18858 AL590639.1-201ENST00000456484 337 ntBASIC5.58□□□□□ -1.52
LIG1P18858 RN7SL97P-201ENST00000486780 299 ntBASIC5.58□□□□□ -1.52
LIG1P18858 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LIG1P18858 AC021146.2-201ENST00000504736 556 ntBASIC5.58□□□□□ -1.52
LIG1P18858 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.58□□□□□ -1.52
LIG1P18858 Y_RNA.665-201ENST00000516177 98 ntBASIC5.58□□□□□ -1.52
LIG1P18858 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.58□□□□□ -1.52
LIG1P18858 NCAPGP2-201ENST00000557911 754 ntBASIC5.58□□□□□ -1.52
LIG1P18858 AC006270.2-201ENST00000578523 652 ntBASIC5.58□□□□□ -1.52
LIG1P18858 MIR4646-201ENST00000580775 63 ntBASIC5.58□□□□□ -1.52
LIG1P18858 UBE2L4-201ENST00000587688 464 ntBASIC5.58□□□□□ -1.52
LIG1P18858 HMGB2P1-201ENST00000591146 634 ntBASIC5.58□□□□□ -1.52
LIG1P18858 AC024940.4-201ENST00000605507 246 ntBASIC5.58□□□□□ -1.52
LIG1P18858 AC124303.1-201ENST00000605703 360 ntBASIC5.58□□□□□ -1.52
LIG1P18858 AC004908.2-201ENST00000609090 574 ntBASIC5.58□□□□□ -1.52
LIG1P18858 uc_338.15-201ENST00000615470 191 ntBASIC5.58□□□□□ -1.52
LIG1P18858 AC084781.2-201ENST00000615568 161 ntBASIC5.58□□□□□ -1.52
LIG1P18858 AL022401.1-201ENST00000619498 108 ntBASIC5.58□□□□□ -1.52
LIG1P18858 AL353662.3-201ENST00000625131 237 ntBASIC5.58□□□□□ -1.52
LIG1P18858 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.58□□□□□ -1.52
LIG1P18858 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LIG1P18858 AC015813.6-201ENST00000624409 5808 ntBASIC5.58□□□□□ -1.52
LIG1P18858 AP001273.1-201ENST00000624493 3152 ntBASIC5.58□□□□□ -1.52
LIG1P18858 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
LIG1P18858 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.58□□□□□ -1.52
LIG1P18858 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.58□□□□□ -1.52
LIG1P18858 DHX9P1-201ENST00000436565 3076 ntBASIC5.58□□□□□ -1.52
LIG1P18858 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LIG1P18858 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LIG1P18858 SCN1A-220ENST00000641603 12506 ntBASIC5.57□□□□□ -1.52
LIG1P18858 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LIG1P18858 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.57□□□□□ -1.52
LIG1P18858 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LIG1P18858 RNU6-639P-201ENST00000384074 107 ntBASIC5.57□□□□□ -1.52
LIG1P18858 RNU6-38P-201ENST00000384085 107 ntBASIC5.57□□□□□ -1.52
LIG1P18858 Y_RNA.445-201ENST00000384168 102 ntBASIC5.57□□□□□ -1.52
LIG1P18858 RNU6-1207P-201ENST00000384343 107 ntBASIC5.57□□□□□ -1.52
LIG1P18858 MIR454-201ENST00000390180 115 ntBASIC5.57□□□□□ -1.52
LIG1P18858 AL583835.1-201ENST00000399570 407 ntBASIC5.57□□□□□ -1.52
LIG1P18858 U3.35-201ENST00000408405 208 ntBASIC5.57□□□□□ -1.52
LIG1P18858 RN7SKP235-201ENST00000410662 305 ntBASIC5.57□□□□□ -1.52
LIG1P18858 AC245054.2-201ENST00000415639 319 ntBASIC5.57□□□□□ -1.52
LIG1P18858 DDX39BP1-205ENST00000422507 192 ntBASIC5.57□□□□□ -1.52
LIG1P18858 AL590233.1-201ENST00000430017 456 ntBASIC5.57□□□□□ -1.52
LIG1P18858 AC092162.1-201ENST00000432828 434 ntBASIC5.57□□□□□ -1.52
LIG1P18858 RPS3AP52-201ENST00000435639 297 ntBASIC5.57□□□□□ -1.52
LIG1P18858 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.57□□□□□ -1.52
LIG1P18858 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.57□□□□□ -1.52
LIG1P18858 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.57□□□□□ -1.52
LIG1P18858 RNU6-333P-201ENST00000459117 107 ntBASIC5.57□□□□□ -1.52
LIG1P18858 AC012181.1-201ENST00000479895 423 ntBASIC5.57□□□□□ -1.52
LIG1P18858 RPL21P99-201ENST00000480369 423 ntBASIC5.57□□□□□ -1.52
LIG1P18858 AC005726.1-201ENST00000494679 427 ntBASIC5.57□□□□□ -1.52
LIG1P18858 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.57□□□□□ -1.52
LIG1P18858 NDUFB5P1-201ENST00000508134 564 ntBASIC5.57□□□□□ -1.52
LIG1P18858 AC004062.1-201ENST00000509926 645 ntBASIC5.57□□□□□ -1.52
LIG1P18858 RNU6-1046P-201ENST00000516538 107 ntBASIC5.57□□□□□ -1.52
LIG1P18858 RN7SKP219-201ENST00000516825 296 ntBASIC5.57□□□□□ -1.52
LIG1P18858 NARSP2-201ENST00000518524 679 ntBASIC5.57□□□□□ -1.52
LIG1P18858 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.57□□□□□ -1.52
LIG1P18858 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.57□□□□□ -1.52
LIG1P18858 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.57□□□□□ -1.52
LIG1P18858 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.57□□□□□ -1.52
LIG1P18858 AL512782.1-201ENST00000603093 364 ntBASIC5.57□□□□□ -1.52
LIG1P18858 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.57□□□□□ -1.52
LIG1P18858 AL132822.1-201ENST00000617063 513 ntBASIC5.57□□□□□ -1.52
LIG1P18858 AP000843.1-201ENST00000624880 701 ntBASIC5.57□□□□□ -1.52
LIG1P18858 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LIG1P18858 AP004289.2-201ENST00000444413 1457 ntBASIC5.57□□□□□ -1.52
LIG1P18858 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
LIG1P18858 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LIG1P18858 AC009951.1-201ENST00000623674 2614 ntBASIC5.57□□□□□ -1.52
LIG1P18858 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LIG1P18858 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIG1P18858 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIG1P18858 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIG1P18858 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.56□□□□□ -1.52
LIG1P18858 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIG1P18858 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
LIG1P18858 RN7SKP44-201ENST00000363602 316 ntBASIC5.56□□□□□ -1.52
LIG1P18858 U3.12-201ENST00000364498 214 ntBASIC5.56□□□□□ -1.52
LIG1P18858 RNA5SP428-201ENST00000365129 132 ntBASIC5.56□□□□□ -1.52
LIG1P18858 SNORD96B-201ENST00000386148 79 ntBASIC5.56□□□□□ -1.52
LIG1P18858 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.56□□□□□ -1.52
LIG1P18858 CYCSP10-201ENST00000417973 294 ntBASIC5.56□□□□□ -1.52
LIG1P18858 RPL31P45-201ENST00000419532 356 ntBASIC5.56□□□□□ -1.52
LIG1P18858 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.56□□□□□ -1.52
LIG1P18858 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.56□□□□□ -1.52
LIG1P18858 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.56□□□□□ -1.52
LIG1P18858 RPS27P18-201ENST00000431701 247 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms