Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SMPD1P17405 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SMPD1P17405 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.08□□□□□ -1.44
SMPD1P17405 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SMPD1P17405 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SMPD1P17405 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SMPD1P17405 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SMPD1P17405 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SMPD1P17405 AL591135.1-201ENST00000401578 5914 ntBASIC6.07□□□□□ -1.44
SMPD1P17405 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SMPD1P17405 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SMPD1P17405 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SMPD1P17405 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SMPD1P17405 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SMPD1P17405 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SMPD1P17405 Y_RNA.16-201ENST00000362421 102 ntBASIC6.07□□□□□ -1.44
SMPD1P17405 SNORA17.1-201ENST00000362945 126 ntBASIC6.07□□□□□ -1.44
SMPD1P17405 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SMPD1P17405 RNU6-47P-201ENST00000383866 107 ntBASIC6.07□□□□□ -1.44
SMPD1P17405 RNU6-44P-201ENST00000384045 107 ntBASIC6.07□□□□□ -1.44
SMPD1P17405 Y_RNA.626-201ENST00000411288 95 ntBASIC6.07□□□□□ -1.44
SMPD1P17405 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.07□□□□□ -1.44
SMPD1P17405 AL513124.1-201ENST00000450410 614 ntBASIC6.07□□□□□ -1.44
SMPD1P17405 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.07□□□□□ -1.44
SMPD1P17405 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC6.07□□□□□ -1.44
SMPD1P17405 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC6.07□□□□□ -1.44
SMPD1P17405 RPS27P26-201ENST00000494583 239 ntBASIC6.07□□□□□ -1.44
SMPD1P17405 RPL7P47-201ENST00000497299 556 ntBASIC6.07□□□□□ -1.44
SMPD1P17405 AL139099.1-201ENST00000497398 403 ntBASIC6.07□□□□□ -1.44
SMPD1P17405 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.07□□□□□ -1.44
SMPD1P17405 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.07□□□□□ -1.44
SMPD1P17405 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.07□□□□□ -1.44
SMPD1P17405 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC6.07□□□□□ -1.44
SMPD1P17405 SULT1C2P2-201ENST00000562517 294 ntBASIC6.07□□□□□ -1.44
SMPD1P17405 MIR1244-1-201ENST00000612829 85 ntBASIC6.07□□□□□ -1.44
SMPD1P17405 MIR1244-3-201ENST00000635744 85 ntBASIC6.07□□□□□ -1.44
SMPD1P17405 MIR1244-2-201ENST00000636449 85 ntBASIC6.07□□□□□ -1.44
SMPD1P17405 MIR1244-4-202ENST00000636813 85 ntBASIC6.07□□□□□ -1.44
SMPD1P17405 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SMPD1P17405 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.07□□□□□ -1.44
SMPD1P17405 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
SMPD1P17405 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.07□□□□□ -1.44
SMPD1P17405 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SMPD1P17405 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SMPD1P17405 AL445437.1-201ENST00000623157 3087 ntBASIC6.07□□□□□ -1.44
SMPD1P17405 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
SMPD1P17405 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
SMPD1P17405 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SMPD1P17405 HSPA8P14-201ENST00000552265 1805 ntBASIC6.06□□□□□ -1.44
SMPD1P17405 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SMPD1P17405 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SMPD1P17405 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SMPD1P17405 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SMPD1P17405 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
SMPD1P17405 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SMPD1P17405 Y_RNA.76-201ENST00000362931 109 ntBASIC6.06□□□□□ -1.44
SMPD1P17405 RNU6-153P-201ENST00000364422 104 ntBASIC6.06□□□□□ -1.44
SMPD1P17405 Y_RNA.240-201ENST00000364469 95 ntBASIC6.06□□□□□ -1.44
SMPD1P17405 RPS29P13-201ENST00000402041 169 ntBASIC6.06□□□□□ -1.44
SMPD1P17405 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.06□□□□□ -1.44
SMPD1P17405 CBX1P3-201ENST00000413296 527 ntBASIC6.06□□□□□ -1.44
SMPD1P17405 RPS11P7-201ENST00000442125 465 ntBASIC6.06□□□□□ -1.44
SMPD1P17405 AP000942.1-201ENST00000463969 747 ntBASIC6.06□□□□□ -1.44
SMPD1P17405 AC009127.1-201ENST00000467090 155 ntBASIC6.06□□□□□ -1.44
SMPD1P17405 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.06□□□□□ -1.44
SMPD1P17405 SCARNA24.2-201ENST00000516968 130 ntBASIC6.06□□□□□ -1.44
SMPD1P17405 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.06□□□□□ -1.44
SMPD1P17405 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.06□□□□□ -1.44
SMPD1P17405 AC063949.1-201ENST00000552900 865 ntBASIC6.06□□□□□ -1.44
SMPD1P17405 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.06□□□□□ -1.44
SMPD1P17405 AC104465.1-201ENST00000611365 139 ntBASIC6.06□□□□□ -1.44
SMPD1P17405 AL365222.1-201ENST00000614661 98 ntBASIC6.06□□□□□ -1.44
SMPD1P17405 MIR376A1-201ENST00000616574 68 ntBASIC6.06□□□□□ -1.44
SMPD1P17405 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SMPD1P17405 OR4F13P-202ENST00000560066 2054 ntBASIC6.06□□□□□ -1.44
SMPD1P17405 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SMPD1P17405 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SMPD1P17405 OSBPL9P4-201ENST00000371707 1800 ntBASIC6.06□□□□□ -1.44
SMPD1P17405 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SMPD1P17405 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.06□□□□□ -1.44
SMPD1P17405 AC090740.1-201ENST00000623193 2262 ntBASIC6.05□□□□□ -1.44
SMPD1P17405 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SMPD1P17405 AC006484.1-201ENST00000435086 1884 ntBASIC6.05□□□□□ -1.44
SMPD1P17405 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SMPD1P17405 HAUS6P2-201ENST00000433254 2404 ntBASIC6.05□□□□□ -1.44
SMPD1P17405 AL078621.3-201ENST00000623707 2042 ntBASIC6.05□□□□□ -1.44
SMPD1P17405 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SMPD1P17405 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SMPD1P17405 RNU5B-2P-201ENST00000363036 113 ntBASIC6.05□□□□□ -1.44
SMPD1P17405 RNU6-715P-201ENST00000365204 103 ntBASIC6.05□□□□□ -1.44
SMPD1P17405 Y_RNA.383-201ENST00000383855 97 ntBASIC6.05□□□□□ -1.44
SMPD1P17405 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SMPD1P17405 PRRC2CP1-201ENST00000404428 159 ntBASIC6.05□□□□□ -1.44
SMPD1P17405 RPL19P1-201ENST00000411635 428 ntBASIC6.05□□□□□ -1.44
SMPD1P17405 AL035461.1-201ENST00000421490 332 ntBASIC6.05□□□□□ -1.44
SMPD1P17405 AL354766.1-201ENST00000423396 542 ntBASIC6.05□□□□□ -1.44
SMPD1P17405 RPL12P17-201ENST00000432393 498 ntBASIC6.05□□□□□ -1.44
SMPD1P17405 AZGP1P2-201ENST00000454506 345 ntBASIC6.05□□□□□ -1.44
SMPD1P17405 AC098583.1-201ENST00000480875 255 ntBASIC6.05□□□□□ -1.44
SMPD1P17405 RAB9BP1-201ENST00000519581 626 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms