Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC117532.1-201ENST00000514638 323 ntBASIC3.16□□□□□ -1.9
CFTRP13569 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.16□□□□□ -1.9
CFTRP13569 AL356575.1-201ENST00000603008 283 ntBASIC3.16□□□□□ -1.9
CFTRP13569 AC067838.1-201ENST00000606064 577 ntBASIC3.16□□□□□ -1.9
CFTRP13569 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.16□□□□□ -1.9
CFTRP13569 AC099778.2-201ENST00000610904 211 ntBASIC3.16□□□□□ -1.9
CFTRP13569 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.16□□□□□ -1.9
CFTRP13569 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.16□□□□□ -1.9
CFTRP13569 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
CFTRP13569 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.15□□□□□ -1.91
CFTRP13569 MIR1276-201ENST00000408707 83 ntBASIC3.15□□□□□ -1.91
CFTRP13569 AC099336.2-201ENST00000422457 254 ntBASIC3.15□□□□□ -1.91
CFTRP13569 AL009174.1-201ENST00000426577 416 ntBASIC3.15□□□□□ -1.91
CFTRP13569 USP9YP7-201ENST00000436723 430 ntBASIC3.15□□□□□ -1.91
CFTRP13569 RPL34P26-201ENST00000445636 354 ntBASIC3.15□□□□□ -1.91
CFTRP13569 USP9YP32-201ENST00000452432 430 ntBASIC3.15□□□□□ -1.91
CFTRP13569 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.15□□□□□ -1.91
CFTRP13569 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.15□□□□□ -1.91
CFTRP13569 AC010872.1-201ENST00000624225 675 ntBASIC3.15□□□□□ -1.91
CFTRP13569 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
CFTRP13569 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CFTRP13569 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CFTRP13569 RPS7P9-201ENST00000414704 586 ntBASIC3.14□□□□□ -1.91
CFTRP13569 RPL23AP62-201ENST00000463396 453 ntBASIC3.14□□□□□ -1.91
CFTRP13569 FABP5P6-201ENST00000510588 409 ntBASIC3.14□□□□□ -1.91
CFTRP13569 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.14□□□□□ -1.91
CFTRP13569 CBX3P4-201ENST00000538909 354 ntBASIC3.14□□□□□ -1.91
CFTRP13569 OR4T1P-201ENST00000554933 911 ntBASIC3.14□□□□□ -1.91
CFTRP13569 SNORD39.2-201ENST00000579995 76 ntBASIC3.14□□□□□ -1.91
CFTRP13569 AC009314.1-201ENST00000603871 304 ntBASIC3.14□□□□□ -1.91
CFTRP13569 MIR8081-201ENST00000611533 95 ntBASIC3.14□□□□□ -1.91
CFTRP13569 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CFTRP13569 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CFTRP13569 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CFTRP13569 RNU2-20P-201ENST00000410425 191 ntBASIC3.13□□□□□ -1.91
CFTRP13569 AC013268.2-201ENST00000420753 337 ntBASIC3.13□□□□□ -1.91
CFTRP13569 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.13□□□□□ -1.91
CFTRP13569 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.13□□□□□ -1.91
CFTRP13569 OR4P1P-201ENST00000530808 1136 ntBASIC3.13□□□□□ -1.91
CFTRP13569 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.13□□□□□ -1.91
CFTRP13569 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.13□□□□□ -1.91
CFTRP13569 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.13□□□□□ -1.91
CFTRP13569 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CFTRP13569 AC010329.2-201ENST00000595195 2737 ntBASIC3.13□□□□□ -1.91
CFTRP13569 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
CFTRP13569 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.12□□□□□ -1.91
CFTRP13569 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.12□□□□□ -1.91
CFTRP13569 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.12□□□□□ -1.91
CFTRP13569 SNRPGP9-201ENST00000456025 225 ntBASIC3.12□□□□□ -1.91
CFTRP13569 NDUFA5P6-201ENST00000542110 379 ntBASIC3.12□□□□□ -1.91
CFTRP13569 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.12□□□□□ -1.91
CFTRP13569 AL589994.2-201ENST00000621124 579 ntBASIC3.12□□□□□ -1.91
CFTRP13569 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.12□□□□□ -1.91
CFTRP13569 AC009452.1-201ENST00000640823 606 ntBASIC3.12□□□□□ -1.91
CFTRP13569 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CFTRP13569 AL592437.2-201ENST00000421655 2434 ntBASIC3.11□□□□□ -1.91
CFTRP13569 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CFTRP13569 RNU6-146P-201ENST00000384602 108 ntBASIC3.11□□□□□ -1.91
CFTRP13569 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.11□□□□□ -1.91
CFTRP13569 HMGB1P27-201ENST00000431429 603 ntBASIC3.11□□□□□ -1.91
CFTRP13569 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.11□□□□□ -1.91
CFTRP13569 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.11□□□□□ -1.91
CFTRP13569 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.11□□□□□ -1.91
CFTRP13569 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.11□□□□□ -1.91
CFTRP13569 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.11□□□□□ -1.91
CFTRP13569 VN1R74P-201ENST00000613259 503 ntBASIC3.11□□□□□ -1.91
CFTRP13569 AC114546.3-201ENST00000623582 1734 ntBASIC3.11□□□□□ -1.91
CFTRP13569 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.1□□□□□ -1.91
CFTRP13569 AC104332.2-201ENST00000429959 156 ntBASIC3.1□□□□□ -1.91
CFTRP13569 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CFTRP13569 AL157827.1-201ENST00000447622 132 ntBASIC3.1□□□□□ -1.91
CFTRP13569 AC245517.4-201ENST00000448601 281 ntBASIC3.1□□□□□ -1.91
CFTRP13569 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.1□□□□□ -1.91
CFTRP13569 RNU6-826P-201ENST00000516827 104 ntBASIC3.1□□□□□ -1.91
CFTRP13569 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.1□□□□□ -1.91
CFTRP13569 AC103988.1-201ENST00000566382 2177 ntBASIC3.1□□□□□ -1.91
CFTRP13569 RNA5SP160-201ENST00000364866 120 ntBASIC3.09□□□□□ -1.91
CFTRP13569 RNU1-57P-201ENST00000384491 166 ntBASIC3.09□□□□□ -1.91
CFTRP13569 BTBD10P2-201ENST00000404779 676 ntBASIC3.09□□□□□ -1.91
CFTRP13569 AL138787.1-202ENST00000437804 898 ntBASIC3.09□□□□□ -1.91
CFTRP13569 ARL2BPP2-201ENST00000550907 489 ntBASIC3.09□□□□□ -1.91
CFTRP13569 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CFTRP13569 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.09□□□□□ -1.91
CFTRP13569 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CFTRP13569 AC116447.1-201ENST00000613153 453 ntBASIC3.09□□□□□ -1.91
CFTRP13569 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.09□□□□□ -1.91
CFTRP13569 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
CFTRP13569 AC026241.1-201ENST00000517873 2142 ntBASIC3.09□□□□□ -1.91
CFTRP13569 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CFTRP13569 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CFTRP13569 HIGD1AP11-201ENST00000438361 280 ntBASIC3.09□□□□□ -1.92
CFTRP13569 RPL23AP7-203ENST00000449021 469 ntBASIC3.09□□□□□ -1.92
CFTRP13569 CFTRP1-201ENST00000456646 183 ntBASIC3.09□□□□□ -1.92
CFTRP13569 MTCO1P42-201ENST00000457379 726 ntBASIC3.09□□□□□ -1.92
CFTRP13569 snoU13.18-201ENST00000459483 104 ntBASIC3.09□□□□□ -1.92
CFTRP13569 AC008571.1-201ENST00000467232 300 ntBASIC3.09□□□□□ -1.92
CFTRP13569 RNA5SP490-201ENST00000517141 136 ntBASIC3.09□□□□□ -1.92
CFTRP13569 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.09□□□□□ -1.92
CFTRP13569 AC025881.1-201ENST00000518851 512 ntBASIC3.09□□□□□ -1.92
CFTRP13569 IGLV3-17-201ENST00000519099 244 ntBASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms