Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 CYCSP45-201ENST00000402289 315 ntBASIC3.33□□□□□ -1.88
TOP1P11387 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TOP1P11387 RNA5SP38-201ENST00000410750 119 ntBASIC3.33□□□□□ -1.88
TOP1P11387 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.33□□□□□ -1.88
TOP1P11387 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.33□□□□□ -1.88
TOP1P11387 RPS24P13-201ENST00000442520 397 ntBASIC3.33□□□□□ -1.88
TOP1P11387 AC112653.1-201ENST00000443851 386 ntBASIC3.33□□□□□ -1.88
TOP1P11387 RNA5SP310-201ENST00000459084 116 ntBASIC3.33□□□□□ -1.88
TOP1P11387 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.33□□□□□ -1.88
TOP1P11387 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.33□□□□□ -1.88
TOP1P11387 AP003102.1-201ENST00000525638 661 ntBASIC3.33□□□□□ -1.88
TOP1P11387 OSBPL9P3-201ENST00000534523 595 ntBASIC3.33□□□□□ -1.88
TOP1P11387 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.33□□□□□ -1.88
TOP1P11387 AC090666.1-201ENST00000578241 445 ntBASIC3.33□□□□□ -1.88
TOP1P11387 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.33□□□□□ -1.88
TOP1P11387 ELOCP29-201ENST00000588193 334 ntBASIC3.33□□□□□ -1.88
TOP1P11387 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.33□□□□□ -1.88
TOP1P11387 AC068880.4-201ENST00000623082 495 ntBASIC3.33□□□□□ -1.88
TOP1P11387 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TOP1P11387 MTCO1P4-201ENST00000520516 1409 ntBASIC3.33□□□□□ -1.88
TOP1P11387 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
TOP1P11387 RNU1-35P-201ENST00000362782 153 ntBASIC3.32□□□□□ -1.88
TOP1P11387 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.32□□□□□ -1.88
TOP1P11387 AL035405.1-201ENST00000400795 710 ntBASIC3.32□□□□□ -1.88
TOP1P11387 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.32□□□□□ -1.88
TOP1P11387 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.32□□□□□ -1.88
TOP1P11387 AL158050.1-201ENST00000416077 457 ntBASIC3.32□□□□□ -1.88
TOP1P11387 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.32□□□□□ -1.88
TOP1P11387 VN1R42P-201ENST00000424651 344 ntBASIC3.32□□□□□ -1.88
TOP1P11387 AL390023.1-201ENST00000428836 262 ntBASIC3.32□□□□□ -1.88
TOP1P11387 HSFY7P-201ENST00000432672 318 ntBASIC3.32□□□□□ -1.88
TOP1P11387 HSFY8P-201ENST00000437934 318 ntBASIC3.32□□□□□ -1.88
TOP1P11387 AC105272.1-201ENST00000438604 198 ntBASIC3.32□□□□□ -1.88
TOP1P11387 AL645638.1-201ENST00000440519 361 ntBASIC3.32□□□□□ -1.88
TOP1P11387 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.32□□□□□ -1.88
TOP1P11387 AC002542.1-201ENST00000440683 193 ntBASIC3.32□□□□□ -1.88
TOP1P11387 AC005002.1-201ENST00000447458 540 ntBASIC3.32□□□□□ -1.88
TOP1P11387 HSFY5P-201ENST00000453726 309 ntBASIC3.32□□□□□ -1.88
TOP1P11387 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.32□□□□□ -1.88
TOP1P11387 MTCO2P9-201ENST00000503214 694 ntBASIC3.32□□□□□ -1.88
TOP1P11387 RN7SKP282-201ENST00000516824 299 ntBASIC3.32□□□□□ -1.88
TOP1P11387 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.32□□□□□ -1.88
TOP1P11387 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.32□□□□□ -1.88
TOP1P11387 AP001804.3-201ENST00000525146 880 ntBASIC3.32□□□□□ -1.88
TOP1P11387 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TOP1P11387 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.32□□□□□ -1.88
TOP1P11387 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.32□□□□□ -1.88
TOP1P11387 AC006504.3-201ENST00000586818 523 ntBASIC3.32□□□□□ -1.88
TOP1P11387 DNAJC19P3-201ENST00000594491 331 ntBASIC3.32□□□□□ -1.88
TOP1P11387 BNIP3P39-201ENST00000601077 554 ntBASIC3.32□□□□□ -1.88
TOP1P11387 AC245100.7-201ENST00000609678 442 ntBASIC3.32□□□□□ -1.88
TOP1P11387 MIR8084-201ENST00000614105 89 ntBASIC3.32□□□□□ -1.88
TOP1P11387 AL138880.2-201ENST00000616214 239 ntBASIC3.32□□□□□ -1.88
TOP1P11387 ZNF663P-202ENST00000641770 1131 ntBASIC3.32□□□□□ -1.88
TOP1P11387 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.32□□□□□ -1.88
TOP1P11387 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TOP1P11387 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.31□□□□□ -1.88
TOP1P11387 AC111188.2-201ENST00000529697 1387 ntBASIC3.31□□□□□ -1.88
TOP1P11387 AC008432.1-201ENST00000615912 1320 ntBASIC3.31□□□□□ -1.88
TOP1P11387 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TOP1P11387 FAT1P1-201ENST00000406588 507 ntBASIC3.31□□□□□ -1.88
TOP1P11387 AL023807.1-201ENST00000407932 359 ntBASIC3.31□□□□□ -1.88
TOP1P11387 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.31□□□□□ -1.88
TOP1P11387 AL451074.5-201ENST00000415894 435 ntBASIC3.31□□□□□ -1.88
TOP1P11387 SSXP9-201ENST00000417503 292 ntBASIC3.31□□□□□ -1.88
TOP1P11387 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.31□□□□□ -1.88
TOP1P11387 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.31□□□□□ -1.88
TOP1P11387 AC087499.2-201ENST00000432861 149 ntBASIC3.31□□□□□ -1.88
TOP1P11387 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.31□□□□□ -1.88
TOP1P11387 AL158053.1-201ENST00000441503 453 ntBASIC3.31□□□□□ -1.88
TOP1P11387 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.31□□□□□ -1.88
TOP1P11387 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.31□□□□□ -1.88
TOP1P11387 RPS4XP6-201ENST00000477670 797 ntBASIC3.31□□□□□ -1.88
TOP1P11387 AP001025.2-201ENST00000490908 477 ntBASIC3.31□□□□□ -1.88
TOP1P11387 RN7SKP132-201ENST00000516001 208 ntBASIC3.31□□□□□ -1.88
TOP1P11387 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.31□□□□□ -1.88
TOP1P11387 ZNF705CP-201ENST00000530515 889 ntBASIC3.31□□□□□ -1.88
TOP1P11387 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.31□□□□□ -1.88
TOP1P11387 GTF3AP2-201ENST00000557014 266 ntBASIC3.31□□□□□ -1.88
TOP1P11387 AP005205.1-201ENST00000563503 508 ntBASIC3.31□□□□□ -1.88
TOP1P11387 AC023824.3-201ENST00000569003 562 ntBASIC3.31□□□□□ -1.88
TOP1P11387 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
TOP1P11387 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.31□□□□□ -1.88
TOP1P11387 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TOP1P11387 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TOP1P11387 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.31□□□□□ -1.88
TOP1P11387 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TOP1P11387 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TOP1P11387 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TOP1P11387 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TOP1P11387 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.3□□□□□ -1.88
TOP1P11387 Y_RNA.111-201ENST00000363248 100 ntBASIC3.3□□□□□ -1.88
TOP1P11387 RNU6-799P-201ENST00000363567 107 ntBASIC3.3□□□□□ -1.88
TOP1P11387 CD24P4-201ENST00000382840 243 ntBASIC3.3□□□□□ -1.88
TOP1P11387 SNORA1.3-201ENST00000384676 136 ntBASIC3.3□□□□□ -1.88
TOP1P11387 MIR512-1-201ENST00000384913 84 ntBASIC3.3□□□□□ -1.88
TOP1P11387 MIR181B1-201ENST00000385240 110 ntBASIC3.3□□□□□ -1.88
TOP1P11387 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.3□□□□□ -1.88
TOP1P11387 AL133384.1-201ENST00000412744 351 ntBASIC3.3□□□□□ -1.88
TOP1P11387 AC000041.1-201ENST00000439655 175 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms