Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.79□□□□□ -1.64
SNRPA1P09661 AC109583.1-201ENST00000432156 268 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 Z99127.3-201ENST00000448158 395 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.79□□□□□ -1.64
SNRPA1P09661 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.79□□□□□ -1.64
SNRPA1P09661 MTCO3P2-201ENST00000457365 171 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 AC010683.1-201ENST00000473673 378 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SNRPA1P09661 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.79□□□□□ -1.64
SNRPA1P09661 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.79□□□□□ -1.64
SNRPA1P09661 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.79□□□□□ -1.64
SNRPA1P09661 AC008549.1-201ENST00000512900 643 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 RNA5SP208-201ENST00000516156 78 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 AC104986.1-201ENST00000517978 436 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.79□□□□□ -1.64
SNRPA1P09661 AC008127.2-201ENST00000549925 1075 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.79□□□□□ -1.64
SNRPA1P09661 HMGB3P26-201ENST00000560051 582 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 VN1R79P-201ENST00000593540 513 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.79□□□□□ -1.64
SNRPA1P09661 AC091965.4-201ENST00000607691 587 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 AC078899.5-201ENST00000612475 178 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 AC072046.2-201ENST00000618366 268 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 AL356321.1-201ENST00000621360 228 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.79□□□□□ -1.64
SNRPA1P09661 U6.101-201ENST00000637707 76 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 IPO8P1-201ENST00000455509 3109 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNRPA1P09661 CR848007.1-201ENST00000442354 1699 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 AC117529.2-201ENST00000512159 2068 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SNRPA1P09661 AC097504.1-201ENST00000515103 2415 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SNRPA1P09661 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SNRPA1P09661 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.78□□□□□ -1.64
SNRPA1P09661 Y_RNA.390-201ENST00000383932 102 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 RNU6-761P-201ENST00000384148 107 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 MIR181A1-201ENST00000385026 110 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 MIR34B-201ENST00000385076 84 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 RNA5SP424-201ENST00000390988 115 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 RNU6-952P-201ENST00000391164 108 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 HMGB1P17-201ENST00000403495 628 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.78□□□□□ -1.64
SNRPA1P09661 C1DP2-201ENST00000418167 426 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.78□□□□□ -1.64
SNRPA1P09661 GLRXP1-201ENST00000423261 334 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 AL445669.1-201ENST00000426743 755 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.78□□□□□ -1.64
SNRPA1P09661 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.78□□□□□ -1.64
SNRPA1P09661 AC073614.1-201ENST00000438690 650 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 MTND5P14-201ENST00000441481 1267 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 AC006480.1-201ENST00000449887 378 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.78□□□□□ -1.64
SNRPA1P09661 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.78□□□□□ -1.64
SNRPA1P09661 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.78□□□□□ -1.64
SNRPA1P09661 Z82190.1-201ENST00000454534 490 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 MTCO1P42-201ENST00000457379 726 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 SNORD105B-201ENST00000458770 79 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 FAM172BP-201ENST00000487497 1089 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.78□□□□□ -1.64
SNRPA1P09661 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.78□□□□□ -1.64
SNRPA1P09661 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.78□□□□□ -1.64
SNRPA1P09661 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.78□□□□□ -1.64
SNRPA1P09661 OR5B10P-201ENST00000532869 642 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SNRPA1P09661 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.78□□□□□ -1.64
SNRPA1P09661 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.78□□□□□ -1.64
SNRPA1P09661 MIR5186-201ENST00000577504 120 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 MIR4512-201ENST00000583257 77 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.78□□□□□ -1.64
SNRPA1P09661 AC007179.3-201ENST00000604976 235 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 BCRP9-201ENST00000605312 388 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.78□□□□□ -1.64
SNRPA1P09661 AC009237.17-201ENST00000618111 748 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.78□□□□□ -1.64
SNRPA1P09661 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.78□□□□□ -1.64
SNRPA1P09661 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SNRPA1P09661 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.78□□□□□ -1.64
SNRPA1P09661 AL022578.1-201ENST00000439330 1433 ntBASIC4.78□□□□□ -1.64
SNRPA1P09661 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SNRPA1P09661 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SNRPA1P09661 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SNRPA1P09661 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.78□□□□□ -1.64
SNRPA1P09661 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNRPA1P09661 Z73965.1-201ENST00000623412 2297 ntBASIC4.77□□□□□ -1.65
SNRPA1P09661 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SNRPA1P09661 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.77□□□□□ -1.65
SNRPA1P09661 AC074029.4-201ENST00000624796 1859 ntBASIC4.77□□□□□ -1.65
SNRPA1P09661 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SNRPA1P09661 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SNRPA1P09661 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SNRPA1P09661 RNA5SP52-201ENST00000362448 134 ntBASIC4.77□□□□□ -1.65
SNRPA1P09661 Y_RNA.256-201ENST00000364594 104 ntBASIC4.77□□□□□ -1.65
SNRPA1P09661 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNRPA1P09661 RNU6-769P-201ENST00000384407 104 ntBASIC4.77□□□□□ -1.65
SNRPA1P09661 MIR649-201ENST00000384843 97 ntBASIC4.77□□□□□ -1.65
SNRPA1P09661 EIF5P1-201ENST00000400019 1231 ntBASIC4.77□□□□□ -1.65
SNRPA1P09661 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.77□□□□□ -1.65
SNRPA1P09661 AC245052.5-201ENST00000416320 649 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms