Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.89□□□□□ -2.11
CXCL1P09341 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.89□□□□□ -2.11
CXCL1P09341 DPPA3P1-201ENST00000448050 469 ntBASIC1.89□□□□□ -2.11
CXCL1P09341 MTND2P19-201ENST00000449129 1012 ntBASIC1.89□□□□□ -2.11
CXCL1P09341 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.89□□□□□ -2.11
CXCL1P09341 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.89□□□□□ -2.11
CXCL1P09341 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC1.89□□□□□ -2.11
CXCL1P09341 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.89□□□□□ -2.11
CXCL1P09341 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.89□□□□□ -2.11
CXCL1P09341 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC1.89□□□□□ -2.11
CXCL1P09341 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.89□□□□□ -2.11
CXCL1P09341 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.89□□□□□ -2.11
CXCL1P09341 CBX3P2-202ENST00000583365 535 ntBASIC1.89□□□□□ -2.11
CXCL1P09341 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.89□□□□□ -2.11
CXCL1P09341 MIR6840-201ENST00000611937 71 ntBASIC1.89□□□□□ -2.11
CXCL1P09341 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.89□□□□□ -2.11
CXCL1P09341 U4.3-201ENST00000621047 82 ntBASIC1.89□□□□□ -2.11
CXCL1P09341 AL356118.1-201ENST00000635272 1078 ntBASIC1.89□□□□□ -2.11
CXCL1P09341 BX649567.1-201ENST00000642071 1134 ntBASIC1.89□□□□□ -2.11
CXCL1P09341 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CXCL1P09341 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CXCL1P09341 RNA5SP374-201ENST00000362939 125 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 RNA5SP456-201ENST00000364002 114 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 RNU6-152P-201ENST00000384037 107 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 MIR7-3-201ENST00000384898 110 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 MIR493-201ENST00000385254 89 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 AL513475.1-201ENST00000406602 315 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 EEF1A1P41-201ENST00000414667 207 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.88□□□□□ -2.11
CXCL1P09341 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.88□□□□□ -2.11
CXCL1P09341 AC079780.1-201ENST00000428259 207 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.88□□□□□ -2.11
CXCL1P09341 ATP5F1P1-201ENST00000433775 569 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.88□□□□□ -2.11
CXCL1P09341 AL606490.8-201ENST00000441624 319 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.88□□□□□ -2.11
CXCL1P09341 DCLRE1CP1-201ENST00000454630 470 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 RPS29P26-201ENST00000477483 171 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 BLNK-209ENST00000495266 440 ntTSL 5 BASIC1.88□□□□□ -2.11
CXCL1P09341 AC114322.1-201ENST00000506771 926 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 AC025768.1-201ENST00000510057 267 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 SAP18P1-201ENST00000512058 390 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 AC010374.2-201ENST00000512933 535 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 SNORA31.21-201ENST00000517180 77 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 AC087272.1-201ENST00000523624 533 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.88□□□□□ -2.11
CXCL1P09341 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.88□□□□□ -2.11
CXCL1P09341 MED28P6-201ENST00000558776 231 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 FAM60BP-201ENST00000578364 658 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.88□□□□□ -2.11
CXCL1P09341 MIR3609-201ENST00000582661 80 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 MIR3158-1-201ENST00000583596 81 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 MIR4448-201ENST00000584360 86 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 VN1R78P-201ENST00000597393 564 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.88□□□□□ -2.11
CXCL1P09341 AL353748.2-201ENST00000622148 471 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 AL109659.3-201ENST00000624985 950 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.88□□□□□ -2.11
CXCL1P09341 MIR203B-201ENST00000636080 86 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 ABBA01000935.2-201ENST00000637477 838 ntBASIC1.88□□□□□ -2.11
CXCL1P09341 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CXCL1P09341 AP000526.1-201ENST00000603308 1388 ntBASIC1.87□□□□□ -2.11
CXCL1P09341 OFD1P5Y-201ENST00000447585 2590 ntBASIC1.87□□□□□ -2.11
CXCL1P09341 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CXCL1P09341 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.87□□□□□ -2.11
CXCL1P09341 RNU6-1151P-201ENST00000384684 107 ntBASIC1.87□□□□□ -2.11
CXCL1P09341 Z86062.1-201ENST00000406773 777 ntBASIC1.87□□□□□ -2.11
CXCL1P09341 RNA5SP338-201ENST00000410495 85 ntBASIC1.87□□□□□ -2.11
CXCL1P09341 AC007064.1-201ENST00000412238 351 ntBASIC1.87□□□□□ -2.11
CXCL1P09341 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.87□□□□□ -2.11
CXCL1P09341 AC087499.2-201ENST00000432861 149 ntBASIC1.87□□□□□ -2.11
CXCL1P09341 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.87□□□□□ -2.11
CXCL1P09341 AC092798.1-201ENST00000458542 409 ntBASIC1.87□□□□□ -2.11
CXCL1P09341 RBM43P1-201ENST00000476891 1081 ntBASIC1.87□□□□□ -2.11
CXCL1P09341 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC1.87□□□□□ -2.11
CXCL1P09341 MRPL42P6-201ENST00000486397 371 ntBASIC1.87□□□□□ -2.11
CXCL1P09341 HIGD1AP13-201ENST00000509878 289 ntBASIC1.87□□□□□ -2.11
CXCL1P09341 OR5BM1P-201ENST00000512021 366 ntBASIC1.87□□□□□ -2.11
CXCL1P09341 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.87□□□□□ -2.11
CXCL1P09341 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.87□□□□□ -2.11
CXCL1P09341 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.87□□□□□ -2.11
CXCL1P09341 AP000889.2-201ENST00000532684 490 ntBASIC1.87□□□□□ -2.11
CXCL1P09341 AC243972.3-201ENST00000539655 198 ntBASIC1.87□□□□□ -2.11
CXCL1P09341 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.87□□□□□ -2.11
CXCL1P09341 AC126177.3-201ENST00000551839 688 ntBASIC1.87□□□□□ -2.11
CXCL1P09341 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.87□□□□□ -2.11
CXCL1P09341 AC090616.3-201ENST00000582184 217 ntBASIC1.87□□□□□ -2.11
CXCL1P09341 AC025588.3-201ENST00000604182 274 ntBASIC1.87□□□□□ -2.11
CXCL1P09341 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.87□□□□□ -2.11
CXCL1P09341 AC073968.1-201ENST00000618594 637 ntBASIC1.87□□□□□ -2.11
CXCL1P09341 AC079597.1-201ENST00000624306 508 ntBASIC1.87□□□□□ -2.11
CXCL1P09341 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CXCL1P09341 AC069528.2-201ENST00000624849 1991 ntBASIC1.87□□□□□ -2.11
CXCL1P09341 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CXCL1P09341 MTCO1P6-201ENST00000481192 1384 ntBASIC1.86□□□□□ -2.11
CXCL1P09341 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CXCL1P09341 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
CXCL1P09341 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CXCL1P09341 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.86□□□□□ -2.11
CXCL1P09341 RNU6-441P-201ENST00000384545 106 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms