Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC103810.1-201ENST00000579873 453 ntBASIC2.82□□□□□ -1.96
TPM3P06753 AL109618.2-201ENST00000605527 211 ntBASIC2.82□□□□□ -1.96
TPM3P06753 ATP5A1P2-202ENST00000616464 443 ntBASIC2.82□□□□□ -1.96
TPM3P06753 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
TPM3P06753 AC024595.1-201ENST00000623088 387 ntBASIC2.82□□□□□ -1.96
TPM3P06753 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.82□□□□□ -1.96
TPM3P06753 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.82□□□□□ -1.96
TPM3P06753 CRYM-AS1-204ENST00000637983 556 ntBASIC2.82□□□□□ -1.96
TPM3P06753 AC007342.9-201ENST00000623877 1385 ntBASIC2.82□□□□□ -1.96
TPM3P06753 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.82□□□□□ -1.96
TPM3P06753 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.81□□□□□ -1.96
TPM3P06753 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.81□□□□□ -1.96
TPM3P06753 RNU6-441P-201ENST00000384545 106 ntBASIC2.81□□□□□ -1.96
TPM3P06753 UBA52P6-201ENST00000399822 382 ntBASIC2.81□□□□□ -1.96
TPM3P06753 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.81□□□□□ -1.96
TPM3P06753 AL024507.1-201ENST00000412741 274 ntBASIC2.81□□□□□ -1.96
TPM3P06753 RPS15AP38-201ENST00000413110 372 ntBASIC2.81□□□□□ -1.96
TPM3P06753 AC099677.1-201ENST00000420575 175 ntBASIC2.81□□□□□ -1.96
TPM3P06753 MTCO2P17-201ENST00000424336 677 ntBASIC2.81□□□□□ -1.96
TPM3P06753 AC004022.1-201ENST00000447766 1066 ntBASIC2.81□□□□□ -1.96
TPM3P06753 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.81□□□□□ -1.96
TPM3P06753 AL359385.1-201ENST00000456509 365 ntBASIC2.81□□□□□ -1.96
TPM3P06753 SNORA84-201ENST00000459229 133 ntBASIC2.81□□□□□ -1.96
TPM3P06753 AC017007.3-201ENST00000479865 435 ntBASIC2.81□□□□□ -1.96
TPM3P06753 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.81□□□□□ -1.96
TPM3P06753 AC026427.2-201ENST00000506228 536 ntBASIC2.81□□□□□ -1.96
TPM3P06753 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.81□□□□□ -1.96
TPM3P06753 AC114322.1-201ENST00000506771 926 ntBASIC2.81□□□□□ -1.96
TPM3P06753 HMGB3P3-201ENST00000510526 400 ntBASIC2.81□□□□□ -1.96
TPM3P06753 RNA5SP471-201ENST00000516971 106 ntBASIC2.81□□□□□ -1.96
TPM3P06753 CKS1BP7-201ENST00000522230 235 ntBASIC2.81□□□□□ -1.96
TPM3P06753 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.81□□□□□ -1.96
TPM3P06753 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.81□□□□□ -1.96
TPM3P06753 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.81□□□□□ -1.96
TPM3P06753 AC012254.4-201ENST00000588843 273 ntBASIC2.81□□□□□ -1.96
TPM3P06753 CR589904.2-201ENST00000612533 440 ntBASIC2.81□□□□□ -1.96
TPM3P06753 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
TPM3P06753 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.81□□□□□ -1.96
TPM3P06753 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
TPM3P06753 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TPM3P06753 RNU5D-1-201ENST00000363299 116 ntBASIC2.8□□□□□ -1.96
TPM3P06753 RNU1-112P-201ENST00000364401 164 ntBASIC2.8□□□□□ -1.96
TPM3P06753 SET-203ENST00000372688 801 ntTSL 2 BASIC2.8□□□□□ -1.96
TPM3P06753 SNORA18.3-201ENST00000384122 132 ntBASIC2.8□□□□□ -1.96
TPM3P06753 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.8□□□□□ -1.96
TPM3P06753 FABP5P3-201ENST00000437960 408 ntBASIC2.8□□□□□ -1.96
TPM3P06753 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.8□□□□□ -1.96
TPM3P06753 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.8□□□□□ -1.96
TPM3P06753 MTND1P33-201ENST00000446251 917 ntBASIC2.8□□□□□ -1.96
TPM3P06753 AL513328.1-201ENST00000446460 224 ntBASIC2.8□□□□□ -1.96
TPM3P06753 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.8□□□□□ -1.96
TPM3P06753 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.8□□□□□ -1.96
TPM3P06753 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.8□□□□□ -1.96
TPM3P06753 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.8□□□□□ -1.96
TPM3P06753 AC022080.3-201ENST00000544433 482 ntBASIC2.8□□□□□ -1.96
TPM3P06753 AC007115.1-201ENST00000546853 234 ntBASIC2.8□□□□□ -1.96
TPM3P06753 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.8□□□□□ -1.96
TPM3P06753 AC106028.5-201ENST00000610332 395 ntBASIC2.8□□□□□ -1.96
TPM3P06753 AC073968.1-201ENST00000618594 637 ntBASIC2.8□□□□□ -1.96
TPM3P06753 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.8□□□□□ -1.96
TPM3P06753 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.8□□□□□ -1.96
TPM3P06753 AC110079.1-202ENST00000635213 138 ntBASIC2.8□□□□□ -1.96
TPM3P06753 AC005336.3-201ENST00000623833 2679 ntBASIC2.8□□□□□ -1.96
TPM3P06753 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.8□□□□□ -1.96
TPM3P06753 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
TPM3P06753 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
TPM3P06753 AP000526.1-201ENST00000603308 1388 ntBASIC2.79□□□□□ -1.96
TPM3P06753 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
TPM3P06753 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.79□□□□□ -1.96
TPM3P06753 RNU6-730P-201ENST00000383954 104 ntBASIC2.79□□□□□ -1.96
TPM3P06753 MIR493-201ENST00000385254 89 ntBASIC2.79□□□□□ -1.96
TPM3P06753 RNU2-17P-201ENST00000410290 190 ntBASIC2.79□□□□□ -1.96
TPM3P06753 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.79□□□□□ -1.96
TPM3P06753 AC104073.1-201ENST00000451988 151 ntBASIC2.79□□□□□ -1.96
TPM3P06753 RPL23AP70-201ENST00000483361 460 ntBASIC2.79□□□□□ -1.96
TPM3P06753 RPS27P23-201ENST00000487608 251 ntBASIC2.79□□□□□ -1.96
TPM3P06753 RPS15AP34-201ENST00000487776 387 ntBASIC2.79□□□□□ -1.96
TPM3P06753 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TPM3P06753 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.79□□□□□ -1.96
TPM3P06753 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.79□□□□□ -1.96
TPM3P06753 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
TPM3P06753 AC027104.1-201ENST00000563702 681 ntBASIC2.79□□□□□ -1.96
TPM3P06753 FAM60BP-201ENST00000578364 658 ntBASIC2.79□□□□□ -1.96
TPM3P06753 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
TPM3P06753 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TPM3P06753 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
TPM3P06753 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
TPM3P06753 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TPM3P06753 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TPM3P06753 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.96
TPM3P06753 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
TPM3P06753 SNORD62.1-201ENST00000362541 86 ntBASIC2.78□□□□□ -1.96
TPM3P06753 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.78□□□□□ -1.96
TPM3P06753 RPL7P30-201ENST00000420888 709 ntBASIC2.78□□□□□ -1.96
TPM3P06753 TMEM167AP1-201ENST00000423409 219 ntBASIC2.78□□□□□ -1.96
TPM3P06753 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.78□□□□□ -1.96
TPM3P06753 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TPM3P06753 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.78□□□□□ -1.96
TPM3P06753 AC098826.1-201ENST00000433943 471 ntBASIC2.78□□□□□ -1.96
TPM3P06753 AL590762.3-201ENST00000436372 640 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 505.5 ms