Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.66□□□□□ -1.98
APOEP02649 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.66□□□□□ -1.98
APOEP02649 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.66□□□□□ -1.98
APOEP02649 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
APOEP02649 AC128657.1-201ENST00000549459 145 ntBASIC2.66□□□□□ -1.98
APOEP02649 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.66□□□□□ -1.98
APOEP02649 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.66□□□□□ -1.98
APOEP02649 AC090666.1-201ENST00000578241 445 ntBASIC2.66□□□□□ -1.98
APOEP02649 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.66□□□□□ -1.98
APOEP02649 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.66□□□□□ -1.98
APOEP02649 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.66□□□□□ -1.98
APOEP02649 AC106791.2-201ENST00000604680 391 ntBASIC2.66□□□□□ -1.98
APOEP02649 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
APOEP02649 MIR6817-201ENST00000615588 66 ntBASIC2.66□□□□□ -1.98
APOEP02649 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.66□□□□□ -1.98
APOEP02649 AC007275.1-201ENST00000621243 671 ntBASIC2.66□□□□□ -1.98
APOEP02649 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.66□□□□□ -1.98
APOEP02649 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.66□□□□□ -1.98
APOEP02649 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
APOEP02649 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
APOEP02649 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.65□□□□□ -1.99
APOEP02649 RNU6-543P-201ENST00000362576 108 ntBASIC2.65□□□□□ -1.99
APOEP02649 RNU6-1180P-201ENST00000364935 107 ntBASIC2.65□□□□□ -1.99
APOEP02649 UBE2V1P2-201ENST00000397758 440 ntBASIC2.65□□□□□ -1.99
APOEP02649 HMGN2P30-201ENST00000423237 256 ntBASIC2.65□□□□□ -1.99
APOEP02649 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.65□□□□□ -1.99
APOEP02649 RAB11AP1-201ENST00000442978 646 ntBASIC2.65□□□□□ -1.99
APOEP02649 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.65□□□□□ -1.99
APOEP02649 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.65□□□□□ -1.99
APOEP02649 AC234775.1-201ENST00000454247 670 ntBASIC2.65□□□□□ -1.99
APOEP02649 AL109741.2-201ENST00000455561 343 ntBASIC2.65□□□□□ -1.99
APOEP02649 AL031183.1-201ENST00000457667 207 ntBASIC2.65□□□□□ -1.99
APOEP02649 KC877373.1-201ENST00000479066 408 ntBASIC2.65□□□□□ -1.99
APOEP02649 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.65□□□□□ -1.99
APOEP02649 AC008565.1-201ENST00000509046 885 ntBASIC2.65□□□□□ -1.99
APOEP02649 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.65□□□□□ -1.99
APOEP02649 AC087276.1-201ENST00000529659 480 ntBASIC2.65□□□□□ -1.99
APOEP02649 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC2.65□□□□□ -1.99
APOEP02649 AC009163.5-201ENST00000575421 637 ntBASIC2.65□□□□□ -1.99
APOEP02649 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.65□□□□□ -1.99
APOEP02649 MIR5194-201ENST00000582634 120 ntBASIC2.65□□□□□ -1.99
APOEP02649 MIR4672-201ENST00000583126 81 ntBASIC2.65□□□□□ -1.99
APOEP02649 AC020895.1-201ENST00000595362 272 ntBASIC2.65□□□□□ -1.99
APOEP02649 RPL23AP78-201ENST00000599928 470 ntBASIC2.65□□□□□ -1.99
APOEP02649 AC009220.3-201ENST00000604318 586 ntBASIC2.65□□□□□ -1.99
APOEP02649 AP001330.4-201ENST00000604350 154 ntBASIC2.65□□□□□ -1.99
APOEP02649 AC128687.1-201ENST00000605304 619 ntBASIC2.65□□□□□ -1.99
APOEP02649 AC026790.2-201ENST00000606282 430 ntBASIC2.65□□□□□ -1.99
APOEP02649 AL355810.1-201ENST00000614629 552 ntBASIC2.65□□□□□ -1.99
APOEP02649 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.65□□□□□ -1.99
APOEP02649 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
APOEP02649 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
APOEP02649 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.64□□□□□ -1.99
APOEP02649 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
APOEP02649 ANKRD36P1-201ENST00000344424 659 ntBASIC2.64□□□□□ -1.99
APOEP02649 AL672167.1-206ENST00000356293 943 ntBASIC2.64□□□□□ -1.99
APOEP02649 RNA5SP68-201ENST00000363885 119 ntBASIC2.64□□□□□ -1.99
APOEP02649 MIR27B-201ENST00000385129 97 ntBASIC2.64□□□□□ -1.99
APOEP02649 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
APOEP02649 RNA5SP252-201ENST00000391131 119 ntBASIC2.64□□□□□ -1.99
APOEP02649 AC080125.1-201ENST00000414888 684 ntBASIC2.64□□□□□ -1.99
APOEP02649 AC006548.1-201ENST00000427470 102 ntBASIC2.64□□□□□ -1.99
APOEP02649 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.64□□□□□ -1.99
APOEP02649 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.64□□□□□ -1.99
APOEP02649 AL645638.1-201ENST00000440519 361 ntBASIC2.64□□□□□ -1.99
APOEP02649 HSFY3P-201ENST00000444242 1191 ntBASIC2.64□□□□□ -1.99
APOEP02649 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.64□□□□□ -1.99
APOEP02649 SNORA59A-201ENST00000459326 152 ntBASIC2.64□□□□□ -1.99
APOEP02649 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
APOEP02649 AC126389.1-201ENST00000477436 290 ntBASIC2.64□□□□□ -1.99
APOEP02649 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.64□□□□□ -1.99
APOEP02649 RNU4-29P-201ENST00000515943 174 ntBASIC2.64□□□□□ -1.99
APOEP02649 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.64□□□□□ -1.99
APOEP02649 AC234778.2-201ENST00000566241 354 ntBASIC2.64□□□□□ -1.99
APOEP02649 MIR5092-201ENST00000583139 88 ntBASIC2.64□□□□□ -1.99
APOEP02649 AL160237.3-201ENST00000604114 1013 ntBASIC2.64□□□□□ -1.99
APOEP02649 AC004775.1-201ENST00000607389 753 ntBASIC2.64□□□□□ -1.99
APOEP02649 AC013468.1-201ENST00000608680 598 ntBASIC2.64□□□□□ -1.99
APOEP02649 AC009570.1-201ENST00000609599 745 ntBASIC2.64□□□□□ -1.99
APOEP02649 AC104237.2-201ENST00000612456 443 ntBASIC2.64□□□□□ -1.99
APOEP02649 AC008083.4-201ENST00000615076 444 ntBASIC2.64□□□□□ -1.99
APOEP02649 AC103798.2-201ENST00000624292 632 ntBASIC2.64□□□□□ -1.99
APOEP02649 AC097372.4-201ENST00000625025 466 ntBASIC2.64□□□□□ -1.99
APOEP02649 CR381572.1-201ENST00000625098 102 ntBASIC2.64□□□□□ -1.99
APOEP02649 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.64□□□□□ -1.99
APOEP02649 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
APOEP02649 AL049780.3-201ENST00000624612 1583 ntBASIC2.63□□□□□ -1.99
APOEP02649 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
APOEP02649 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.63□□□□□ -1.99
APOEP02649 DEFA7P-201ENST00000382676 285 ntBASIC2.63□□□□□ -1.99
APOEP02649 RPS3AP9-201ENST00000417027 792 ntBASIC2.63□□□□□ -1.99
APOEP02649 OR51B8P-201ENST00000449892 769 ntBASIC2.63□□□□□ -1.99
APOEP02649 UBE2DNL-203ENST00000474922 222 ntBASIC2.63□□□□□ -1.99
APOEP02649 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.63□□□□□ -1.99
APOEP02649 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.63□□□□□ -1.99
APOEP02649 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.63□□□□□ -1.99
APOEP02649 AC114781.4-201ENST00000513707 639 ntBASIC2.63□□□□□ -1.99
APOEP02649 AC104057.1-201ENST00000515547 497 ntBASIC2.63□□□□□ -1.99
APOEP02649 RN7SKP24-201ENST00000515888 284 ntBASIC2.63□□□□□ -1.99
APOEP02649 RNA5SP148-201ENST00000516527 94 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms