Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL4A1P02462 RNA5SP190-201ENST00000365222 118 ntBASIC2.3□□□□□ -2.04
COL4A1P02462 U8.10-201ENST00000384260 133 ntBASIC2.3□□□□□ -2.04
COL4A1P02462 MTND4P13-201ENST00000402078 1023 ntBASIC2.3□□□□□ -2.04
COL4A1P02462 MIR1294-201ENST00000408503 142 ntBASIC2.3□□□□□ -2.04
COL4A1P02462 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.3□□□□□ -2.04
COL4A1P02462 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.3□□□□□ -2.04
COL4A1P02462 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.3□□□□□ -2.04
COL4A1P02462 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.3□□□□□ -2.04
COL4A1P02462 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.3□□□□□ -2.04
COL4A1P02462 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.3□□□□□ -2.04
COL4A1P02462 AC103810.1-201ENST00000579873 453 ntBASIC2.3□□□□□ -2.04
COL4A1P02462 OR4K7P-201ENST00000580232 945 ntBASIC2.3□□□□□ -2.04
COL4A1P02462 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.3□□□□□ -2.04
COL4A1P02462 MIR4512-201ENST00000583257 77 ntBASIC2.3□□□□□ -2.04
COL4A1P02462 MIR8081-201ENST00000611533 95 ntBASIC2.3□□□□□ -2.04
COL4A1P02462 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
COL4A1P02462 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.3□□□□□ -2.04
COL4A1P02462 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
COL4A1P02462 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.29□□□□□ -2.04
COL4A1P02462 RNU4-62P-201ENST00000410125 130 ntBASIC2.29□□□□□ -2.04
COL4A1P02462 NDUFB4P6-201ENST00000436819 366 ntBASIC2.29□□□□□ -2.04
COL4A1P02462 RAB9AP5-201ENST00000437794 597 ntBASIC2.29□□□□□ -2.04
COL4A1P02462 RPS26P30-201ENST00000443431 335 ntBASIC2.29□□□□□ -2.04
COL4A1P02462 RAB9AP2-201ENST00000443911 597 ntBASIC2.29□□□□□ -2.04
COL4A1P02462 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.29□□□□□ -2.04
COL4A1P02462 AL021397.1-201ENST00000451806 248 ntBASIC2.29□□□□□ -2.04
COL4A1P02462 AC027673.1-201ENST00000456245 405 ntBASIC2.29□□□□□ -2.04
COL4A1P02462 AC108729.3-201ENST00000513484 108 ntBASIC2.29□□□□□ -2.04
COL4A1P02462 IGHV3-76-201ENST00000522465 295 ntBASIC2.29□□□□□ -2.04
COL4A1P02462 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.29□□□□□ -2.04
COL4A1P02462 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC2.29□□□□□ -2.04
COL4A1P02462 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.29□□□□□ -2.04
COL4A1P02462 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
COL4A1P02462 AC123786.2-201ENST00000603459 275 ntBASIC2.29□□□□□ -2.04
COL4A1P02462 AC090953.1-201ENST00000604305 1092 ntBASIC2.29□□□□□ -2.04
COL4A1P02462 AC007620.3-201ENST00000608131 497 ntBASIC2.29□□□□□ -2.04
COL4A1P02462 AC009570.1-201ENST00000609599 745 ntBASIC2.29□□□□□ -2.04
COL4A1P02462 AC009318.3-201ENST00000616916 503 ntBASIC2.29□□□□□ -2.04
COL4A1P02462 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.29□□□□□ -2.04
COL4A1P02462 AF127577.6-201ENST00000623352 2191 ntBASIC2.29□□□□□ -2.04
COL4A1P02462 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
COL4A1P02462 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
COL4A1P02462 MTND5P7-201ENST00000413558 1798 ntBASIC2.29□□□□□ -2.04
COL4A1P02462 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
COL4A1P02462 RNU6-697P-201ENST00000363348 107 ntBASIC2.28□□□□□ -2.04
COL4A1P02462 ZNF736P10Y-201ENST00000403990 1110 ntBASIC2.28□□□□□ -2.04
COL4A1P02462 HSPE1P26-201ENST00000405341 275 ntBASIC2.28□□□□□ -2.04
COL4A1P02462 RNA5SP270-201ENST00000411361 118 ntBASIC2.28□□□□□ -2.04
COL4A1P02462 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.28□□□□□ -2.04
COL4A1P02462 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
COL4A1P02462 RPL23AP70-201ENST00000483361 460 ntBASIC2.28□□□□□ -2.04
COL4A1P02462 MIR3683-201ENST00000580847 82 ntBASIC2.28□□□□□ -2.04
COL4A1P02462 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.28□□□□□ -2.04
COL4A1P02462 AC007687.1-201ENST00000602704 304 ntBASIC2.28□□□□□ -2.04
COL4A1P02462 AL590410.1-201ENST00000617925 333 ntBASIC2.28□□□□□ -2.04
COL4A1P02462 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.28□□□□□ -2.04
COL4A1P02462 AP000553.5-201ENST00000641933 54 ntBASIC2.28□□□□□ -2.04
COL4A1P02462 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.28□□□□□ -2.04
COL4A1P02462 AL512283.1-201ENST00000606756 1384 ntBASIC2.28□□□□□ -2.04
COL4A1P02462 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
COL4A1P02462 Y_RNA.796-201ENST00000364268 102 ntBASIC2.28□□□□□ -2.05
COL4A1P02462 Y_RNA.799-201ENST00000364992 102 ntBASIC2.28□□□□□ -2.05
COL4A1P02462 RNU6-14P-201ENST00000384630 106 ntBASIC2.28□□□□□ -2.05
COL4A1P02462 RNA5SP105-201ENST00000391123 113 ntBASIC2.28□□□□□ -2.05
COL4A1P02462 HMGB1P13-201ENST00000406019 642 ntBASIC2.28□□□□□ -2.05
COL4A1P02462 AC098592.2-201ENST00000413158 265 ntBASIC2.28□□□□□ -2.05
COL4A1P02462 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.28□□□□□ -2.05
COL4A1P02462 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.28□□□□□ -2.05
COL4A1P02462 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
COL4A1P02462 snoZ278.1-201ENST00000517059 112 ntBASIC2.28□□□□□ -2.05
COL4A1P02462 OR5D17P-201ENST00000531492 978 ntBASIC2.28□□□□□ -2.05
COL4A1P02462 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.05
COL4A1P02462 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.28□□□□□ -2.05
COL4A1P02462 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC2.28□□□□□ -2.05
COL4A1P02462 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.28□□□□□ -2.05
COL4A1P02462 MIR4781-201ENST00000585250 76 ntBASIC2.28□□□□□ -2.05
COL4A1P02462 RPP40P2-201ENST00000603596 712 ntBASIC2.28□□□□□ -2.05
COL4A1P02462 AC009314.1-201ENST00000603871 304 ntBASIC2.28□□□□□ -2.05
COL4A1P02462 AC091488.1-201ENST00000604239 660 ntBASIC2.28□□□□□ -2.05
COL4A1P02462 AP004372.1-201ENST00000604842 844 ntBASIC2.28□□□□□ -2.05
COL4A1P02462 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.28□□□□□ -2.05
COL4A1P02462 AL592494.3-201ENST00000609485 464 ntBASIC2.28□□□□□ -2.05
COL4A1P02462 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.05
COL4A1P02462 AL353748.2-201ENST00000622148 471 ntBASIC2.28□□□□□ -2.05
COL4A1P02462 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.05
COL4A1P02462 AC103988.1-201ENST00000566382 2177 ntBASIC2.28□□□□□ -2.05
COL4A1P02462 ZNF271P-202ENST00000465539 1970 ntBASIC2.28□□□□□ -2.05
COL4A1P02462 AC005336.3-201ENST00000623833 2679 ntBASIC2.27□□□□□ -2.05
COL4A1P02462 AC005539.1-201ENST00000443768 1479 ntBASIC2.27□□□□□ -2.05
COL4A1P02462 MIR124-3-201ENST00000384866 87 ntBASIC2.27□□□□□ -2.05
COL4A1P02462 MIR489-201ENST00000384923 84 ntBASIC2.27□□□□□ -2.05
COL4A1P02462 BTBD10P2-201ENST00000404779 676 ntBASIC2.27□□□□□ -2.05
COL4A1P02462 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.27□□□□□ -2.05
COL4A1P02462 AC104332.2-201ENST00000429959 156 ntBASIC2.27□□□□□ -2.05
COL4A1P02462 ELOCP10-201ENST00000440624 327 ntBASIC2.27□□□□□ -2.05
COL4A1P02462 RPL31P53-201ENST00000457065 348 ntBASIC2.27□□□□□ -2.05
COL4A1P02462 AC091179.1-201ENST00000461606 579 ntBASIC2.27□□□□□ -2.05
COL4A1P02462 RNU6-250P-201ENST00000516958 103 ntBASIC2.27□□□□□ -2.05
COL4A1P02462 HMGN1P28-201ENST00000521340 364 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms