Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB2O43679 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.84□□□□□ -1.79
LDB2O43679 AC053481.3-201ENST00000577881 843 ntBASIC3.84□□□□□ -1.79
LDB2O43679 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.84□□□□□ -1.79
LDB2O43679 TPMTP1-201ENST00000592307 737 ntBASIC3.84□□□□□ -1.79
LDB2O43679 AL137849.1-201ENST00000604767 169 ntBASIC3.84□□□□□ -1.79
LDB2O43679 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.84□□□□□ -1.79
LDB2O43679 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.84□□□□□ -1.79
LDB2O43679 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LDB2O43679 AC013476.2-201ENST00000614456 459 ntBASIC3.84□□□□□ -1.79
LDB2O43679 AC008250.2-201ENST00000615261 205 ntBASIC3.84□□□□□ -1.79
LDB2O43679 AP001506.1-201ENST00000615444 211 ntBASIC3.84□□□□□ -1.79
LDB2O43679 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.84□□□□□ -1.79
LDB2O43679 AC079684.1-201ENST00000621405 437 ntBASIC3.84□□□□□ -1.79
LDB2O43679 AC099654.12-201ENST00000639868 649 ntBASIC3.84□□□□□ -1.79
LDB2O43679 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
LDB2O43679 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.84□□□□□ -1.79
LDB2O43679 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LDB2O43679 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
LDB2O43679 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.84□□□□□ -1.8
LDB2O43679 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
LDB2O43679 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.84□□□□□ -1.8
LDB2O43679 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
LDB2O43679 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
LDB2O43679 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
LDB2O43679 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
LDB2O43679 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LDB2O43679 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LDB2O43679 RNU6-259P-201ENST00000383999 107 ntBASIC3.83□□□□□ -1.8
LDB2O43679 RNU6-878P-201ENST00000384578 110 ntBASIC3.83□□□□□ -1.8
LDB2O43679 Y_RNA.582-201ENST00000391023 95 ntBASIC3.83□□□□□ -1.8
LDB2O43679 RPL31P1-201ENST00000398116 372 ntBASIC3.83□□□□□ -1.8
LDB2O43679 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.83□□□□□ -1.8
LDB2O43679 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.83□□□□□ -1.8
LDB2O43679 MTATP6P27-201ENST00000416987 621 ntBASIC3.83□□□□□ -1.8
LDB2O43679 AC012065.2-201ENST00000421295 375 ntBASIC3.83□□□□□ -1.8
LDB2O43679 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.83□□□□□ -1.8
LDB2O43679 AL035410.1-201ENST00000427409 427 ntBASIC3.83□□□□□ -1.8
LDB2O43679 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.83□□□□□ -1.8
LDB2O43679 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.83□□□□□ -1.8
LDB2O43679 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.83□□□□□ -1.8
LDB2O43679 MTATP6P13-201ENST00000438531 667 ntBASIC3.83□□□□□ -1.8
LDB2O43679 SNORA71B-202ENST00000439232 272 ntBASIC3.83□□□□□ -1.8
LDB2O43679 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.83□□□□□ -1.8
LDB2O43679 RN7SL542P-201ENST00000467147 294 ntBASIC3.83□□□□□ -1.8
LDB2O43679 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.83□□□□□ -1.8
LDB2O43679 TRBV12-2-201ENST00000489763 344 ntBASIC3.83□□□□□ -1.8
LDB2O43679 AC112204.1-201ENST00000502591 103 ntBASIC3.83□□□□□ -1.8
LDB2O43679 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.83□□□□□ -1.8
LDB2O43679 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.83□□□□□ -1.8
LDB2O43679 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.83□□□□□ -1.8
LDB2O43679 RNA5SP208-201ENST00000516156 78 ntBASIC3.83□□□□□ -1.8
LDB2O43679 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.83□□□□□ -1.8
LDB2O43679 SUMO2P20-201ENST00000520803 283 ntBASIC3.83□□□□□ -1.8
LDB2O43679 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.83□□□□□ -1.8
LDB2O43679 OR5G4P-201ENST00000525251 760 ntBASIC3.83□□□□□ -1.8
LDB2O43679 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LDB2O43679 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.83□□□□□ -1.8
LDB2O43679 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LDB2O43679 RN7SL703P-201ENST00000578485 302 ntBASIC3.83□□□□□ -1.8
LDB2O43679 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.83□□□□□ -1.8
LDB2O43679 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.83□□□□□ -1.8
LDB2O43679 AL353997.4-201ENST00000586196 166 ntBASIC3.83□□□□□ -1.8
LDB2O43679 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.83□□□□□ -1.8
LDB2O43679 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.83□□□□□ -1.8
LDB2O43679 AC005255.1-201ENST00000593748 216 ntBASIC3.83□□□□□ -1.8
LDB2O43679 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.83□□□□□ -1.8
LDB2O43679 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.83□□□□□ -1.8
LDB2O43679 AC007566.2-201ENST00000603642 413 ntBASIC3.83□□□□□ -1.8
LDB2O43679 AL390208.1-201ENST00000605885 644 ntBASIC3.83□□□□□ -1.8
LDB2O43679 MIR92B-201ENST00000607575 96 ntBASIC3.83□□□□□ -1.8
LDB2O43679 AC091965.4-201ENST00000607691 587 ntBASIC3.83□□□□□ -1.8
LDB2O43679 AL513477.2-201ENST00000607858 568 ntBASIC3.83□□□□□ -1.8
LDB2O43679 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.83□□□□□ -1.8
LDB2O43679 AC004009.2-201ENST00000623016 728 ntBASIC3.83□□□□□ -1.8
LDB2O43679 AC095031.1-201ENST00000623685 672 ntBASIC3.83□□□□□ -1.8
LDB2O43679 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.83□□□□□ -1.8
LDB2O43679 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.83□□□□□ -1.8
LDB2O43679 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
LDB2O43679 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
LDB2O43679 AC005832.2-201ENST00000538921 1430 ntBASIC3.83□□□□□ -1.8
LDB2O43679 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.83□□□□□ -1.8
LDB2O43679 PNPT1P2-201ENST00000456768 2050 ntBASIC3.83□□□□□ -1.8
LDB2O43679 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LDB2O43679 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
LDB2O43679 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LDB2O43679 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LDB2O43679 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.82□□□□□ -1.8
LDB2O43679 SNORD82-201ENST00000365530 70 ntBASIC3.82□□□□□ -1.8
LDB2O43679 RNU6-744P-201ENST00000365557 107 ntBASIC3.82□□□□□ -1.8
LDB2O43679 RNU5A-6P-201ENST00000384136 116 ntBASIC3.82□□□□□ -1.8
LDB2O43679 RNU6-1316P-201ENST00000384242 108 ntBASIC3.82□□□□□ -1.8
LDB2O43679 SNORD115.1-201ENST00000391109 76 ntBASIC3.82□□□□□ -1.8
LDB2O43679 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.82□□□□□ -1.8
LDB2O43679 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.82□□□□□ -1.8
LDB2O43679 AL603766.1-201ENST00000407763 664 ntBASIC3.82□□□□□ -1.8
LDB2O43679 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.82□□□□□ -1.8
LDB2O43679 Y_RNA.608-201ENST00000410647 95 ntBASIC3.82□□□□□ -1.8
LDB2O43679 RN7SKP159-201ENST00000410657 292 ntBASIC3.82□□□□□ -1.8
LDB2O43679 HMGB3P23-201ENST00000414981 585 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms